Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4617 |
Symbol | |
ID | 5211603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5784639 |
End bp | 5785583 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598196 |
Product | ABC transporter related |
Protein accession | YP_001278898 |
Protein GI | 148658693 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.299444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCA TTGAAACCTG GGACCTGACT CGCGCTTTCG GCGACCGTGT TGCGGTCGAG CGCCTGACGT TCACTGCCCC GCGCGGGGCG GTGTTCGGTT TTCTGGGACC AAACGGCGCC GGCAAGACGA CAACGGTGCG CATGCTGGCA GCGCTGATCG CCCCGACATC CGGCAGCGCC GTTGTAGCCG GGTATCGCCT CGGTGAAGAA GACCAGGACA TCCGCCGCAA TGTCGGGCTG CTGACCGAAA GCCCGGGGTT GTACGAGCGG CTCAGCGCGC GCCAGAACCT GATCTTCTTT GCGCGGCTCT ACGATCTCGA TGCTGCCCGT GCCGAAGCGC AAACTGAACG ATACCTGCGC ATGCTTGGTC TGTGGGATCG CCGTGACGAT CCGGTGGGCA GTTTCTCGAA AGGTATGCGA CAGAAACTTG CCATCGCACG CGCGTTGTTG CACGAACCGG CGATTATCTT TCTCGACGAA CCAACTGCCG GTCTCGATCC GGAAGCCGCC CGCACGGTGC GCGAGTTCAT TAAAGAACTA CGCGCCGAGG GGCGCACAAT CTTTCTCACC ACGCACAATC TGCCGGAAGC CGACGAGTTG TGCGATACGA TCGCAGTGTT TCGCACCCGC CTGCTGCGCA TTGGCGCGCC CGACACGCTC CGCGCCGAAC TCTTCGGCAG CAGCACGCGC ATCCGCGTTG CAGGCGACGC AACGATGTTT CTCGATGTGG TGCGTGCACT GCCGTTCGTG CGTGCCGCCG CTGCCAGTGG CGACGCGCTC ACTCTTTCGC TCGACAATCC CGACGAACAG AACCCGATCC TGGTGCAGGC GCTGATCAAG GCAGGCGCTG CGATCCGGTA CGTCGAACCA CGTGAACACT CGCTCGAAGA CGTGTACCTG CACCTGGTGC GCGAAGCAGA ACCGATAGGG CAGTCACATG CGTAA
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Protein sequence | MHAIETWDLT RAFGDRVAVE RLTFTAPRGA VFGFLGPNGA GKTTTVRMLA ALIAPTSGSA VVAGYRLGEE DQDIRRNVGL LTESPGLYER LSARQNLIFF ARLYDLDAAR AEAQTERYLR MLGLWDRRDD PVGSFSKGMR QKLAIARALL HEPAIIFLDE PTAGLDPEAA RTVREFIKEL RAEGRTIFLT THNLPEADEL CDTIAVFRTR LLRIGAPDTL RAELFGSSTR IRVAGDATMF LDVVRALPFV RAAAASGDAL TLSLDNPDEQ NPILVQALIK AGAAIRYVEP REHSLEDVYL HLVREAEPIG QSHA
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