Gene RoseRS_4617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4617 
Symbol 
ID5211603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5784639 
End bp5785583 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID640598196 
ProductABC transporter related 
Protein accessionYP_001278898 
Protein GI148658693 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.299444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCA TTGAAACCTG GGACCTGACT CGCGCTTTCG GCGACCGTGT TGCGGTCGAG 
CGCCTGACGT TCACTGCCCC GCGCGGGGCG GTGTTCGGTT TTCTGGGACC AAACGGCGCC
GGCAAGACGA CAACGGTGCG CATGCTGGCA GCGCTGATCG CCCCGACATC CGGCAGCGCC
GTTGTAGCCG GGTATCGCCT CGGTGAAGAA GACCAGGACA TCCGCCGCAA TGTCGGGCTG
CTGACCGAAA GCCCGGGGTT GTACGAGCGG CTCAGCGCGC GCCAGAACCT GATCTTCTTT
GCGCGGCTCT ACGATCTCGA TGCTGCCCGT GCCGAAGCGC AAACTGAACG ATACCTGCGC
ATGCTTGGTC TGTGGGATCG CCGTGACGAT CCGGTGGGCA GTTTCTCGAA AGGTATGCGA
CAGAAACTTG CCATCGCACG CGCGTTGTTG CACGAACCGG CGATTATCTT TCTCGACGAA
CCAACTGCCG GTCTCGATCC GGAAGCCGCC CGCACGGTGC GCGAGTTCAT TAAAGAACTA
CGCGCCGAGG GGCGCACAAT CTTTCTCACC ACGCACAATC TGCCGGAAGC CGACGAGTTG
TGCGATACGA TCGCAGTGTT TCGCACCCGC CTGCTGCGCA TTGGCGCGCC CGACACGCTC
CGCGCCGAAC TCTTCGGCAG CAGCACGCGC ATCCGCGTTG CAGGCGACGC AACGATGTTT
CTCGATGTGG TGCGTGCACT GCCGTTCGTG CGTGCCGCCG CTGCCAGTGG CGACGCGCTC
ACTCTTTCGC TCGACAATCC CGACGAACAG AACCCGATCC TGGTGCAGGC GCTGATCAAG
GCAGGCGCTG CGATCCGGTA CGTCGAACCA CGTGAACACT CGCTCGAAGA CGTGTACCTG
CACCTGGTGC GCGAAGCAGA ACCGATAGGG CAGTCACATG CGTAA
 
Protein sequence
MHAIETWDLT RAFGDRVAVE RLTFTAPRGA VFGFLGPNGA GKTTTVRMLA ALIAPTSGSA 
VVAGYRLGEE DQDIRRNVGL LTESPGLYER LSARQNLIFF ARLYDLDAAR AEAQTERYLR
MLGLWDRRDD PVGSFSKGMR QKLAIARALL HEPAIIFLDE PTAGLDPEAA RTVREFIKEL
RAEGRTIFLT THNLPEADEL CDTIAVFRTR LLRIGAPDTL RAELFGSSTR IRVAGDATMF
LDVVRALPFV RAAAASGDAL TLSLDNPDEQ NPILVQALIK AGAAIRYVEP REHSLEDVYL
HLVREAEPIG QSHA