Gene RoseRS_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4612 
Symbol 
ID5211598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5777256 
End bp5778791 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content58% 
IMG OID640598191 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001278893 
Protein GI148658688 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG GTGGATTGCT TTCACGTCAT GCGCGCTACC GCTCGAATCA CACCGCTGTG 
ATCGTCGGCG ATGCGCGGCT CACGTATCGG GAATTCAACG CACGAGTCAA CAAAGTCGCA
CACGCGCTGC TGGGGCTGGG TTTGACCAAA GGCGACAAGA TTGCAACTGT GCTGCCGAAC
TGCATGGAGT TGCTCGAAGT CTACTGGGCG GCAGCGAAGA CAGGACTGGT GGTGGTTCCG
ATGAGCACGC TGCTGCGTGG ACAGGGGCTG GCGACCCTGC TGCGCGACTC GGACACTGCG
GCGGTGGTGA CCGATTCAGC GCACGCGCCG GTGATCGATG CCATTCGCAG CGACCTTCTC
ATCGACCCGG CACGGTTTTT GATTACCGAC GCCCCGGATC GTCCGGGGTA TCGCAATTAT
CACGCGCTGG TTGTGCCGAT GTCGGAAGAT GATCCGACGG GGATCGAACT GTGCAGCGAT
GACCCGTACA ACATCATGTA CAGCAGCGGC ACGACCGGTT TGCCGAAGGG GATCGTTCTC
ACACACGGCG TGCGCGCCGG ATACGGAACG ATCTTTGCGT CGTCGTACCG CATCACGCCA
GAAAGCGTCA TTCTGCACGC AGGCGCTCTC GTTTTCAACG GCGCATTTCT GACCTTTATG
CCGGCGTTCT ATCTGGGCGC CACCTATATT CTGATGCCAG CATTCAATAC GCGACAGTTG
ATCGAGATCG CAATCCGTGA GAAGGTGACG CACATTAAGA TGGTTCCGTC GCAGATTGTC
GCTCTGCTCA ACGAACCCGA CTTCGACGAA CGCCATGTGC CATCGATCGA GATGCTCGGC
TCAGTTGGGG CGCCGTTGCA TATGGAACAC AAACTTGAGC TGGAACGGCG CTTCCCCAAC
CGGCTCTACG AATTGTACGG GTTGACCGAA GGGTTCATGA CCATTCTCGA CAAGTATCAC
CGTGGCGAAA AACTGGGGTC GGTCGGAGTT CCGCCTCCCT TTATGGAGAT CAAAATCATC
GACGATCAGG GGCGCGAACT GCCGCCCGGC GAAGTCGGCG AAATCTGCGG TCGGGGTCCG
TTGATGATGA CCGGCTACTA CAAACGCCCC GATCTGACGG CGCAGGCGGT GGTCAACGGC
TGGTTGCACA GCGGCGACAT GGGGTATGTC GATGCGGATG GGTTCCTCTA TCTGGTTGAT
CGGAAGAAAG ACATGATCAT TTCCGGCGGG ATCAACGTCT TTCCGCGTGA CATCGAAGAG
ATCATCGTTC AGCATCCTGC TGTGCGCGAA GCGGCGGTTT TCGGCGTGCC GAGCGAGAAA
TGGGGCGAAA CGCCGCTGGC GGCGGTCATT CTCAAGTCGC CTGGTCTGGT ATCGGCGGAA
GAGTTGCGCG AATGGATCAA CGCGCGTGTC GAAGCCGGGT ATCAGAAGGT GTCGCAGGTG
GTGATCATGG ACGACTTCCC GCGCAGTGCA GCGGGAAAAA CGCTCAAGCG GGTCATGCGC
GATGAGTACT GGAAGGGGAT GGAGCGCAAG ATTTAA
 
Protein sequence
MHIGGLLSRH ARYRSNHTAV IVGDARLTYR EFNARVNKVA HALLGLGLTK GDKIATVLPN 
CMELLEVYWA AAKTGLVVVP MSTLLRGQGL ATLLRDSDTA AVVTDSAHAP VIDAIRSDLL
IDPARFLITD APDRPGYRNY HALVVPMSED DPTGIELCSD DPYNIMYSSG TTGLPKGIVL
THGVRAGYGT IFASSYRITP ESVILHAGAL VFNGAFLTFM PAFYLGATYI LMPAFNTRQL
IEIAIREKVT HIKMVPSQIV ALLNEPDFDE RHVPSIEMLG SVGAPLHMEH KLELERRFPN
RLYELYGLTE GFMTILDKYH RGEKLGSVGV PPPFMEIKII DDQGRELPPG EVGEICGRGP
LMMTGYYKRP DLTAQAVVNG WLHSGDMGYV DADGFLYLVD RKKDMIISGG INVFPRDIEE
IIVQHPAVRE AAVFGVPSEK WGETPLAAVI LKSPGLVSAE ELREWINARV EAGYQKVSQV
VIMDDFPRSA AGKTLKRVMR DEYWKGMERK I