| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4588 |
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| Symbol | |
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| ID | 5211574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5747623 |
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| End bp | 5748474 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640598167 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001278869 |
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| Protein GI | 148658664 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.213578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGG AAAGCGCACA ATCTCGCCTG GCATCGTACA CTGCTGCGCT CGCCGAACGC
CTGGATCGGC TTCGCGCACT CCCTGACGGC GTTCTTTGCG ATCGCTCGTT GCCGCAGGTG
CGTCTGTGGG TCATTAAGGA AGGGACCTTT ATCAGCCTCT TCTTTCTGAA CCCGGCGAGC
GGCGCGCTCG ATGGACCGAT GTCGCGGATC GACATTGAGC GTCCGCTCCA CCTCCTTGCG
CCGTACAATC GCGCACTTCT GCTCACCCTC CTCTGGCGTC CATCACCGCG CCGTGTGTGC
ATGCTGGGTT TCGGCGGAGG GCGCATCTCA CTGGCGCTCC ACGCGCATCT CCCCAACGTC
ATTATCGATA ATGTCGATAT CGATCCGGCG TTTGAGATGG TTGCCGCCAC GTACTTCGGA
GTGACCTTCG ATGAGCGGCA GCGTCTCCAC ATCGCCGATG CACAGGAGTA CCTCCGGCAA
TCGCCGCACC GCTACGACAT CATCTTCATG GATGCATTCA GCGATGCGCG CGACCATCTG
GATCACCTGG CAACGGCTGA GTTCTATGCC CTCTGTCAGA AGCGCCTGCT GCCCGGCGGC
GTTATCGGTA TCAATCTGCT CCGCAGCGAC CCACGCTTTG CTGCGAAAGC GCACGTGTTC
CGCACGTCCT TCCGCACAAC ACTGGCAGCG CCGCTGCGCC ATTCGCTGGT GCTGTTCGGC
GCCGGTCGTA TGCCAGCGCC GGTAACAACC CTCAGGGAGC GCGCGCACGA CCTGGCGTTA
CGGTATGGCT TCGACGCCGA TCTGACCGAC ATTGCCGCAA CCCTGCGCCC TCTGCGCGAT
AGTATAATCT AA
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| Protein sequence | MALESAQSRL ASYTAALAER LDRLRALPDG VLCDRSLPQV RLWVIKEGTF ISLFFLNPAS
GALDGPMSRI DIERPLHLLA PYNRALLLTL LWRPSPRRVC MLGFGGGRIS LALHAHLPNV
IIDNVDIDPA FEMVAATYFG VTFDERQRLH IADAQEYLRQ SPHRYDIIFM DAFSDARDHL
DHLATAEFYA LCQKRLLPGG VIGINLLRSD PRFAAKAHVF RTSFRTTLAA PLRHSLVLFG
AGRMPAPVTT LRERAHDLAL RYGFDADLTD IAATLRPLRD SII
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