| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4580 |
|---|
| Symbol | |
|---|
| ID | 5211566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5741316 |
|---|
| End bp | 5741762 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640598159 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278861 |
|---|
| Protein GI | 148658656 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00353723 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAA ACCAGAATCA CGTGACCCTG CCTGGATTCG ACCGCACTGC GCTACGGGTC
AATCAGGCAG CGATGATCGT CCTCTTGCTT GCAGCATTCG TCGCCAATAT GCCATGGCTG
GCAGCAACAA CAGCAATCAT CATGGCGCTT GGTGCGATCT CACCTTCACT GGCGCTGTTC
CAGCGTCTCT ACCGGGATGT GTTGCGCCCT GCCGGATTGC TGCGACCCGA TATTCATCAG
GAAGATGCGG CGCCGCACCG TTTTGCACAG GGGATGGGGG CGACGGTGCT CATTCTGGCA
AGTCTTGCGT TGTTTCTCGG TGCACCGACG GTTGGATGGG CGCTGGCGCT GCTGGTCGTT
GCGCTTGCGG CGATCAACCT GGTGTTCGGC TTCTGCGTCG GATGCTTCAT TTTCTTCCAG
ATTCAGCGCC TGGCGCACAG CCGGTAG
|
|---|
| Protein sequence | MSVNQNHVTL PGFDRTALRV NQAAMIVLLL AAFVANMPWL AATTAIIMAL GAISPSLALF
QRLYRDVLRP AGLLRPDIHQ EDAAPHRFAQ GMGATVLILA SLALFLGAPT VGWALALLVV
ALAAINLVFG FCVGCFIFFQ IQRLAHSR
|
|---|
| |