Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4579 |
Symbol | |
ID | 5211565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5740129 |
End bp | 5741325 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598158 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001278860 |
Protein GI | 148658655 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0122865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACATCG CTTTCATCGA TTCGTGGGTT CAATCAAGTG CAGAAGGGAG CGGCACCGCC GTTGCAATCG GCGGACTGCA ACGCACACTC CAGCAGCGCG GCGTCCAGGT CACGCGCCTG ACGCCCATCC AGCCCTGGCC CCGCAACCTG ACAGTGCGCC GACTGTTGTT CAACCTGTAT GTGCCAGCGC TCCTCAATCG CCTGCGGTAC GATCTTGTCG TTGGCTTCGA CATCGATGGT TTTCTCTGGT CGAAGCGCGC ACGACGCACC CCGTATCTGG TGAGCATCAA GGGGGTTCTG GCGGAAGAAG CGCGCCAGGA ACGGGGCTTC GTGCGGCGCC TGCTCTGGTC GCTATCACGG CTCGAAAGGA TCAACGCGCG CAATGCCGAT GGCGTCATTA CGACCTCGGC ATACTGCCGG GAAGCGATCC GGCGACACTA CGGCGTAGCG CATCAACGGG TGCAGCTAGT TCCTGAAGGG ATCGATCTGG CGCGCTGGCA ACGCATTGCG CAGGCGACGC CCCGCCGCAG CGACGGCGCA ACGATCCTCT GTGTGGCGCG CCAGTACCCG CGCAAGCATA TTGCAGACCT GTTACGCGCC ATGCCACTGG TTCGTGCGGC TGTTCCCGCA GCGCGTGCGG TGATTGTCGG CGATGGACCG GAACACGCCC GCCTGCGCGC GCTTGCCGCT GAACTGCGCC TCGGCGCAGC GGTGAACCTG GTCGGCGCCA TTCCTGATGA CGACGTGGTG GCGCAGATGT ACTTCCAGGC CGACGTGTTC TGCCTGCCGA GCGTGCAGGA AGGGTTCGGC ATCGTCTTTC TCGAAGCCAT GGCCAGCGGT TTGCCGATCG TTGCAACCAC TGCCGCAGCA ATCCCCGAAG TCGTGCCGCA TCGCCGCGCC GGATTGCTCG TGCCGCCAGG CGACGTCGGC GCACTGGCGG AAGCGCTGAT CGAACTGCTG CGCAACCCGG ATCAGCGCGC AGCGTATGGC GCCTTCGGTC GAATGCAGGT CGAAGGGTAT GACTGGAACG TGGTCGCCGA CCGGTTCATC GAGCAGGTCG AGCCGTTCGT TGGTGGAACT GCGGCGCATC CAGCCGGGCA GGGCGACTCG AGAGAACTTG ACAAAGTAGA TAAAGTTGCC TATGATTATA CCAGGAAATC TGTCAAAGTC ACTCAAGGAA CGCAGGTATG TCCGTAA
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Protein sequence | MNIAFIDSWV QSSAEGSGTA VAIGGLQRTL QQRGVQVTRL TPIQPWPRNL TVRRLLFNLY VPALLNRLRY DLVVGFDIDG FLWSKRARRT PYLVSIKGVL AEEARQERGF VRRLLWSLSR LERINARNAD GVITTSAYCR EAIRRHYGVA HQRVQLVPEG IDLARWQRIA QATPRRSDGA TILCVARQYP RKHIADLLRA MPLVRAAVPA ARAVIVGDGP EHARLRALAA ELRLGAAVNL VGAIPDDDVV AQMYFQADVF CLPSVQEGFG IVFLEAMASG LPIVATTAAA IPEVVPHRRA GLLVPPGDVG ALAEALIELL RNPDQRAAYG AFGRMQVEGY DWNVVADRFI EQVEPFVGGT AAHPAGQGDS RELDKVDKVA YDYTRKSVKV TQGTQVCP
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