| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4570 |
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| Symbol | |
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| ID | 5211556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5727964 |
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| End bp | 5729307 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640598149 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001278851 |
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| Protein GI | 148658646 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.782068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CGCCAACGCG CAGCATTAAT CTCCGCACGA ACATTCCAGG TCCGCGCTCG
CGCGAACTGC TGGCGCGACG CGAAGCGGCT GTGCCGAATG GTCTTTACAA GGCGCATCAG
ATCGCCATCG AAAGTGCATC GGGTGCGCTG GTGACCGATG TTGACGGTAA TACATTCATC
GATTTCGTCG GCGGCATTGG GGTGCTGAAT GCGGGGCACT GCCCGCCGTC CGTGGTGGCT
GCCATTCAGG ATCAGGCAGC AAAACTGATC CATTTCTCAG CGCTCGTTGG GACGTATGAG
CCGTATGTCG CGCTGTGTGA ACATCTCAAT GCAGTCGTGC CGATCAGCGG TCCCTGCAAG
ACCATTCTGT CCAACAGCGG CGCAGAAGGG GTCGAAAATG CGATCAAGAT CGCCCGCGCC
GCAACCGGAC GCCAGGCGAT CATTGCGTTC GAGGGGGCGT ACCACGGGCG CACGCTGCTG
ACGCTCACAC TCACCAGCAA GTATTCGTTC AAAAAGACGT TCGGACCGTT TGCGCCCGAA
GTGTACCGCG CACCGTTCCC TGCCGCCTAT CGAATGGGGC TGAGCGAAGA AGAGGCGGTC
ACACGGTGCT GGGACGCCTT CGAGCGCATG CTGGTGGCGC ATGTCGGTCC GGAAGCAATC
GCCGCCGTCA TCATCGAACC GGTGCAGGGC GAAGGAGGGT TTATCCCGAC GCCGCGCGCG
TTCATGCGAC GCCTGCGCGA CTTCTGCAAC CGCAATGGCA GCGTGCTGAT CGCCGACGAG
GTACAGTGCG GCTTTGGGCG CACCGGTACA CTGTTTGCGA TGGAGCAGAT GCGGGTCGAG
CCGGACATCC TGGTCAGCGC CAAGTCGATT GCCGCTGGAA TGCCGCTGGC AGCTACAACC
GGACGCGCTG CAATTATGGA TAAGGCGCAT ATCGGCGGTA TTGGCGGCAC CTATGGCGGC
AACCCGCTGG CGTGCGTTGC TGCGCTCGAA GTGCTGAAGA TGTTCAATGA TGGTGAACTG
CTGCGCCGGG CGCATCGGAT CGGCGCAATT GTGCATGAAC GGGGGGCGAT CTGGCAACGC
GAGATACCGC TGGTCGGCGA TGTGCGTGGC ATGGGGGCGA TGATGGCGAT CGAACTGGTG
AAAGACCGCA CGACGCGCGA ACCGGCTGCC GACGAGGTGC TGGAGGTGGT ACGGTACTGC
GCCGAACATG GCGTGCTCAC CATGCGCTCC GGTCTGTACG CCAATTGCAT TCGCCTGCTG
ATGCCGCTGG TCATCACCGA CGATCAATTG CACGAAGGGC TGGATGTGCT GGACGAAGCG
CTGCGTTTTG TGGCGCTGCG CTGA
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| Protein sequence | MTTAPTRSIN LRTNIPGPRS RELLARREAA VPNGLYKAHQ IAIESASGAL VTDVDGNTFI
DFVGGIGVLN AGHCPPSVVA AIQDQAAKLI HFSALVGTYE PYVALCEHLN AVVPISGPCK
TILSNSGAEG VENAIKIARA ATGRQAIIAF EGAYHGRTLL TLTLTSKYSF KKTFGPFAPE
VYRAPFPAAY RMGLSEEEAV TRCWDAFERM LVAHVGPEAI AAVIIEPVQG EGGFIPTPRA
FMRRLRDFCN RNGSVLIADE VQCGFGRTGT LFAMEQMRVE PDILVSAKSI AAGMPLAATT
GRAAIMDKAH IGGIGGTYGG NPLACVAALE VLKMFNDGEL LRRAHRIGAI VHERGAIWQR
EIPLVGDVRG MGAMMAIELV KDRTTREPAA DEVLEVVRYC AEHGVLTMRS GLYANCIRLL
MPLVITDDQL HEGLDVLDEA LRFVALR
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