Gene RoseRS_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4546 
Symbol 
ID5211531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5701258 
End bp5703330 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content58% 
IMG OID640598124 
ProductCna B domain-containing protein 
Protein accessionYP_001278827 
Protein GI148658622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCA GCCAGCAACA CAGCCGGTTT TTCATCCGCA GTCTCGTCGT ACTTCTCACG 
CTTATCTTCT CCGTAACGCT TCTCGTTCCA TCGTCCGATC CGGTTGCATA CGCAAACGAG
CCTCTTCTGC TCAAGACATT TTCGCAGTTC TCGAGAGCAA CAGTCTTTCG TGGCATGTTC
TTCTTCGCCG CCAATGACGG GGTCCACGGT TTCGGGTTGT GGCGCAGCGA CGGCACACCC
GGCGGAACCC AACTGGTCAG GGTCATTCGT CACGGTCCGG GAAGCAATGA AATTCTGGGA
TTTCGGGTTG TCGGCGATAC CCTCTTTTTT GTCGCCGATG ATGGAGTGCA TGGTTTCGAG
TTATGGCGCA GCGACGGTAC GCCCGACGGT ACGACGCTGG TGCGGGATAT TCGCGTCGGG
AGCCAGGGGA GTTTCCACGC CGGAGTATAT GGGGATGTCC AATTGATCGG TGTGGGGAAC
GCGCTCTTCT TCATTGCGAA TGACGGGGTG CATGGTTTCG AGTTATGGCG CAGCGACGGC
ACGCCCGACG GTACGATGCT GGTGCGGGAT ATTCATCCAG GACCGGGAAG CGCGCTCACA
GGAAACGAAA CGCTGGCGGT TATGAATGAT ACGCTGTACT TCATCGCCAA TAGCGGCGAG
GTCGGTTTGT GGCGCAGTGA CGGAACATAC GAAGGAACTT TCCTGATCAG AAATGGCGGA
TTAGACTATT GGAGCGCGCT ACTGGTCAAC AACGGTACGC TCTTCATTGC AACCTACGAC
AGTCTCTGGA AGAGCGATGG AACGCCGGAA GGCACAGTGC TGGTCAGGGA CAGGCTCTGT
ATTGATACCG GTCTGACACA CTTCGCGTTC ATGAACGGTG TGCTCTTCTT CGTCGGTGGT
GAGCGGCGCG AGGGATGGTT TATGGGGTGT GATACCGAAC TCATGCGCAG TGATGGAACC
CCAGAAGGTA CATTTATGGT CAAAGACATC CGCTCATCTG AATCTGACCT TCCTGCCGGT
GGACTGGGGT ATTTCTCGCA CCTGACAGTC GTGAGCAATA CACTCTTTTT CAACGCTAAT
GACGGCATTC ACGGGCGTGA GTTGTGGAAG AGCGATGGCA CGGCAGCAGG CACGGTTATG
GTCAAAGACA TTGACGAGGG TTCGGGGCAT GCGCTGTACC CGACTCCTTT TGTCGTCTTG
AACGGGACGC TCTTCTTCAT TGCCGAGGAC GGCGTTCACG GGCGCGAGTT GTGGAGGAGC
GACGGCACGG CAGCAGGCAC GGTTATGGTC AAAGATATTA TTACTAACGA CCTCTGGCGT
TCCAATCTGA GCAGTCTGAG TATTGGCGCA AGCCTGACCG CCCTGCATAC CATGCTCTTC
TTCAACGTCG ATGATGATTT CGCTCATAGG GATAAATTCG GGTTCTGGCG TTCGGATGGA
ACGGAAGAGG GGACAGTCCA GTTGCTGTCG GAGTGGGCGT ATGCTCGCGC TGTGATCTGC
GGTCAGGTGT TTATAACATC GCAGACCAAT CTGTATACCC TTCTTATCGA CCCCAATCGC
TGCACTATCA GCGGACGGGT GACGGACGGC GCAGGCAACG GAGTGGCGGG GGTGACGGTG
AGCGCAGGCG CGCGCAGCGC GACGACCGAT GCGACCGGGT TCTACACGAT CAGCGGTCTG
CCGACAGGCG TCTACACGCT GACGGCGACG CGCAGCGGCT ACCAGATCAC CCCGGCAAGC
CGGACGGTGA CGGTCAGCGA TCATCTCAGC GGTCAGGATT TTACCGCCAC GCTGCTGACC
TACACGATTA GCGGACGGGT GACGGACGGC GCGGGCAACG GGGTGGCGGG GGTGACGGTG
AGCGCGGGTG AGCGCAGCGC GACGACCGAC GCGAACGGGT TCTACGCGCT CAGCGGTCTT
TCATCAGGGG TTTATGCACT TCGCGCAGAG AAACCGGGTT GTCTTATTGA GCCGGCGCAG
CGCGCGGTGA CGCTGCCGCC AGATCAAGAC GCTCAGGATT TCACTGCCAT CTGCCTGACA
GAGCGCGCGT TTCTCCCGCT TGTGATACGC TGA
 
Protein sequence
MHRSQQHSRF FIRSLVVLLT LIFSVTLLVP SSDPVAYANE PLLLKTFSQF SRATVFRGMF 
FFAANDGVHG FGLWRSDGTP GGTQLVRVIR HGPGSNEILG FRVVGDTLFF VADDGVHGFE
LWRSDGTPDG TTLVRDIRVG SQGSFHAGVY GDVQLIGVGN ALFFIANDGV HGFELWRSDG
TPDGTMLVRD IHPGPGSALT GNETLAVMND TLYFIANSGE VGLWRSDGTY EGTFLIRNGG
LDYWSALLVN NGTLFIATYD SLWKSDGTPE GTVLVRDRLC IDTGLTHFAF MNGVLFFVGG
ERREGWFMGC DTELMRSDGT PEGTFMVKDI RSSESDLPAG GLGYFSHLTV VSNTLFFNAN
DGIHGRELWK SDGTAAGTVM VKDIDEGSGH ALYPTPFVVL NGTLFFIAED GVHGRELWRS
DGTAAGTVMV KDIITNDLWR SNLSSLSIGA SLTALHTMLF FNVDDDFAHR DKFGFWRSDG
TEEGTVQLLS EWAYARAVIC GQVFITSQTN LYTLLIDPNR CTISGRVTDG AGNGVAGVTV
SAGARSATTD ATGFYTISGL PTGVYTLTAT RSGYQITPAS RTVTVSDHLS GQDFTATLLT
YTISGRVTDG AGNGVAGVTV SAGERSATTD ANGFYALSGL SSGVYALRAE KPGCLIEPAQ
RAVTLPPDQD AQDFTAICLT ERAFLPLVIR