Gene RoseRS_4531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4531 
Symbol 
ID5211516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5680040 
End bp5680582 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID640598109 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_001278812 
Protein GI148658607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTT GCGATGAAGT CCGCGCATTG CTGGCGCTTC ACGCCGATGC GGAAATCAAT 
GACGCAGCAC TCCACGATCA TCTCGCCAGG TGCCCGGCGT GCGCCGCATA CTACCGGCGC
AATCGCGTGA TCGACCGAAC GTTGCGCGAA GAACTTCGCT GGGACGTGCC ATCGGTGCTG
ACGGCGCAGT TGATGGCAAT CGCATTGCAG TCTGCCGCCT TCTCCACCGC GCCGCGTCCC
CGTCGCTGGT ATGTCGTGAC CGTCTATACG CTGACGGCGA TGGTTCTGGC GGTATCGCTG
GCGGTCGCCT GGACGTTTGG CGGGAGCCTG GTGATGCAGA TCGGGTTGAA TGATGCACTG
GCGTGGGTGT TCGACACACC GGCTCAGTGG CTGGCACAGG TGATGCCGAT GCAAACCGGG
TCGCAGTGGG TTCTTGAGTT TGCACTGCGG GTGCGCGATC AACTCCTCTG GTTGCTGCTG
GCGGCGATCC TCTGGGCGAT CCTTGATCGT TCGCCTCGTT CTGCGCTTGC CCAAACGGAG
TAG
 
Protein sequence
MLSCDEVRAL LALHADAEIN DAALHDHLAR CPACAAYYRR NRVIDRTLRE ELRWDVPSVL 
TAQLMAIALQ SAAFSTAPRP RRWYVVTVYT LTAMVLAVSL AVAWTFGGSL VMQIGLNDAL
AWVFDTPAQW LAQVMPMQTG SQWVLEFALR VRDQLLWLLL AAILWAILDR SPRSALAQTE