Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4531 |
Symbol | |
ID | 5211516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5680040 |
End bp | 5680582 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640598109 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001278812 |
Protein GI | 148658607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGTT GCGATGAAGT CCGCGCATTG CTGGCGCTTC ACGCCGATGC GGAAATCAAT GACGCAGCAC TCCACGATCA TCTCGCCAGG TGCCCGGCGT GCGCCGCATA CTACCGGCGC AATCGCGTGA TCGACCGAAC GTTGCGCGAA GAACTTCGCT GGGACGTGCC ATCGGTGCTG ACGGCGCAGT TGATGGCAAT CGCATTGCAG TCTGCCGCCT TCTCCACCGC GCCGCGTCCC CGTCGCTGGT ATGTCGTGAC CGTCTATACG CTGACGGCGA TGGTTCTGGC GGTATCGCTG GCGGTCGCCT GGACGTTTGG CGGGAGCCTG GTGATGCAGA TCGGGTTGAA TGATGCACTG GCGTGGGTGT TCGACACACC GGCTCAGTGG CTGGCACAGG TGATGCCGAT GCAAACCGGG TCGCAGTGGG TTCTTGAGTT TGCACTGCGG GTGCGCGATC AACTCCTCTG GTTGCTGCTG GCGGCGATCC TCTGGGCGAT CCTTGATCGT TCGCCTCGTT CTGCGCTTGC CCAAACGGAG TAG
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Protein sequence | MLSCDEVRAL LALHADAEIN DAALHDHLAR CPACAAYYRR NRVIDRTLRE ELRWDVPSVL TAQLMAIALQ SAAFSTAPRP RRWYVVTVYT LTAMVLAVSL AVAWTFGGSL VMQIGLNDAL AWVFDTPAQW LAQVMPMQTG SQWVLEFALR VRDQLLWLLL AAILWAILDR SPRSALAQTE
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