Gene RoseRS_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4529 
Symbol 
ID5211514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5678756 
End bp5679154 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content52% 
IMG OID640598107 
Producthypothetical protein 
Protein accessionYP_001278810 
Protein GI148658605 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.249791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC GGTTGCAGCG ACTTGAAGCG AATGTGCGCG AGCTTCAGCG TTTCCGACAG 
ACATATGCGC TGGAAACCAT CAACCGTGAT CTGCACCTGC AATGGGCTTT GCGGTATGGT
CTTCTCGAAG CGATTCAGAT TGTCATCGAC ACCAGTTGTC ATGTCGTAAG CCGGAAGAAT
CTGGGAACAC CTGCGACATA CGCCGAATGC ATTGAGTTGC TTCATCGTGC CGGATACCTT
GATGACAATC TCGCCAGTGT TCTCTCCGGC ATGATTGGAC TGCGGAATAT TCTGGTGCAC
GAATATGCAT CGATCCAGAT CGAACGGTTG TATGGATTGC TGGATCGATT GGATGACTTC
CGTGATTTTG CCAGGCAGAT CGGGCAACAC CTGCGGTGA
 
Protein sequence
MQARLQRLEA NVRELQRFRQ TYALETINRD LHLQWALRYG LLEAIQIVID TSCHVVSRKN 
LGTPATYAEC IELLHRAGYL DDNLASVLSG MIGLRNILVH EYASIQIERL YGLLDRLDDF
RDFARQIGQH LR