Gene RoseRS_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4516 
Symbol 
ID5211501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5662253 
End bp5663185 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID640598094 
Productalpha/beta hydrolase fold 
Protein accessionYP_001278797 
Protein GI148658592 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.320967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTC ATCTTCCTGA TCCAGTCGAG CGCCTGTTCG ATCCCCTTTC TTACGCGATG 
GTGCCGCTGG TTGACGGGCT GGCGCGCCAC GCACTCGAGC GCCTGGGCGC CTTCGAACAG
ACGCGGCGCA TCAACGGGGT TCCGATCCAC TACTATCTGA TACCATGTCG CCGGCTGGCG
CCGTTGCCGG TGCTCTTCAT TCACGGTATG GGCGATAGCG CCGTCACCTG GAGCCTGGTT
GCACCGCTCG TCGCTCGCCG CCACGATGCC TTCCTGATCG ACCTGCCCGG CTATGGTCTC
TCGGGCCTGC CGCCGGGGAA ATCGTTCGCC TCGATCGCCG ATATGACCGC GATTGTCAGC
GCTTTTGTGC GCGATGTCAT CGCCCGACCG ACACTGCTCG TCGGTAATTC GATGGGCGGG
TGGATCGCAA TACGGGTTGC GGAAACGCAC CCCGATATGG TGCGTGGCGT TGTGTTGATG
AATGCTGGCG GGGCGCTGCT GGACGGTCAT CGCTCATGGG ACCCGTTCAT CGAACTGTTA
TCGCCAGCCG ATGCGCATCA GGCGCGGCAG GTGGCGCGGA TGGTCTTCGG CGCAATTCCG
CCGCCGGTCA GAGAACTCAG CGCGCGCGGC ATGATCAATC TCTTTGCGCG GCAGGTGGTG
CGCGACTTTA TCAGTGCCAC CGATGAGCAT GACTTCCTGA ACGCTGACGA ACTGCGCCAG
GTGCCGACGC CAACCGCGCT GCTGTGGGGA GAGCGTGATC GCTTCCTGCC ACCCGGTTCC
TTCGAGTTCT TCTGCAACCA TCTGTCCCAA CCGTATACGC GCGTGCTTAA ACATTGCGGT
CACCTCCCGC AACGCGAACG TCCGCTGGCG ACGGCGCGCT TCATCAAGCA CTTTGCACAG
CGTATCGCTC CTGCTGTACA ACCGGAGAAC TGA
 
Protein sequence
MAGHLPDPVE RLFDPLSYAM VPLVDGLARH ALERLGAFEQ TRRINGVPIH YYLIPCRRLA 
PLPVLFIHGM GDSAVTWSLV APLVARRHDA FLIDLPGYGL SGLPPGKSFA SIADMTAIVS
AFVRDVIARP TLLVGNSMGG WIAIRVAETH PDMVRGVVLM NAGGALLDGH RSWDPFIELL
SPADAHQARQ VARMVFGAIP PPVRELSARG MINLFARQVV RDFISATDEH DFLNADELRQ
VPTPTALLWG ERDRFLPPGS FEFFCNHLSQ PYTRVLKHCG HLPQRERPLA TARFIKHFAQ
RIAPAVQPEN