Gene RoseRS_4514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4514 
Symbol 
ID5211499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5658953 
End bp5659915 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640598092 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_001278795 
Protein GI148658590 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.654029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC GTGAGTCGCT CTTTATCGGC ATTGATGTCT CCAAACAGAC GCTGGATGTG 
GCGTTTGGCG CCGACCCGCA CGCGCCACGC GAGACGATAC CGTCTACCGA CGAAGGTGTC
CAGCTCCTGG TCACGCGACT CCAGCGCCTG CAGCCGACCC TGATTGTGCT GGAGGCGACC
GGCGGGCTGG AGCGCATGGT GTTCGCCCAA CTGCTCCAGG CTGGCGTGCC GACGGCGCGG
GTGCAGCCAC GCCGCGTGCG CGCCCTGGCG CACGCGGAAG GACGCCAGGC GAAGACCGAC
CGCCTGGATG CCCGGTTGCT CGCCCGCTTT GCCGAACGGG TGCGCCCGCC GCACCACCAA
GCGACGGACG AGCAGCGCGC ATCCTTGCGC GACCTGCTGG TCCGGCGGGA GCAGTTGATT
CAGATGCGGA CGGCTGAGAT CAATCGGTTG ACGGCTGCCG CGCCGAACCT CCGCCCGGGC
ATCCAGCAGC ATATTGATTG GCTGGATCAG GAGATCCGTG CGCTTGAGCA GGAACGCGAC
AACGAGGCGG AGCGCACCGA CGAGGTGCGC CGGAAACGGG AGCTGCGCGA CAGCGTGCCC
GGCATCGGCG CGATCACCGC ACTGAACCTG CTGCTCCGCC TGCCCGAACT GGGGACCATC
AAGCGCACGG AAGCGGCGGC CGTTGTGGGC GTTGCGCCGT ATGCCAATCA GAGCGGCGCA
CAGCACAAAC CCCGGCATAT CTCCGGCGGC AGGAGGGATG TGCGCAGCGT GTTGTACATG
GCGACCCTGG CGGCCACGCG GCGCCGTCTG GTCAGGCGCG CCTTCTATCA GCGCCTGTGT
CAAGCTGGCA AGCCGCGCAA GGTCGCCATC GTCGCTGCGA TGCGCAAGCT GCTGACTATT
CTCGGCGCAA TATTGCGTCA GCAAAAGCCC TGGGATCCGG CTGTGCATAC GAGCGCCCCT
TGA
 
Protein sequence
MASRESLFIG IDVSKQTLDV AFGADPHAPR ETIPSTDEGV QLLVTRLQRL QPTLIVLEAT 
GGLERMVFAQ LLQAGVPTAR VQPRRVRALA HAEGRQAKTD RLDARLLARF AERVRPPHHQ
ATDEQRASLR DLLVRREQLI QMRTAEINRL TAAAPNLRPG IQQHIDWLDQ EIRALEQERD
NEAERTDEVR RKRELRDSVP GIGAITALNL LLRLPELGTI KRTEAAAVVG VAPYANQSGA
QHKPRHISGG RRDVRSVLYM ATLAATRRRL VRRAFYQRLC QAGKPRKVAI VAAMRKLLTI
LGAILRQQKP WDPAVHTSAP