Gene RoseRS_4508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4508 
Symbol 
ID5211493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5650260 
End bp5651486 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content62% 
IMG OID640598086 
Producthypothetical protein 
Protein accessionYP_001278789 
Protein GI148658584 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.314055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCA TGATTGATGG CATTCCTGTC TGGGGTGAAC ACGATGAGGG AACCATCGAG 
CAGATCAAAC GGTGCGCCAG CGACCGGGAA GCGGTCAAGG CTGCACTGAT GGCTGATGGG
CACCTCGGAT ACAGCATGCC GATCGGCGGC GTCGTCGCAT ACCGCGATGC CGTCAGTCCC
AGCGGCGTGG GGTACGACAT TTCATGCGGC ATCAAAGGTG TGCGCACCAA CCTGCGCGCC
GACGACATTC GCAAGGATAT CAAACGCATC ATGGATCAGG TTGCGCGCGA GGTGGTTTTC
GGTCTTGGCG GAACGAGCGG TAAGGCTGCC GATCATCCAC TCTTCGACGA TCCCACATGG
CGCGATCTGC CGCAGGTCGG CAAACTGCGC CAGCTGGCGC GTGAGCAACT CGGTACGGTT
GGTTCAGGCA ACCATTGGGT CGATATTCTT GAGGACGAAG AGGGGTGGGT GTGGGTCGCC
GCCCATTTTG GCAGCCGCGG TCTCGGTCAT CGCATCGCCA GCGGCTTCCT CAACCTGGCG
CACGGGAAAC CGTTCGACGC GCCCGCGCCG GGTGAGTCGA TGCAGCAACC AGCAACGGTC
ATCTCGCTAC GCAGCGACCT GGGACAGGCA TACTGGCAGG CGATGACCCT CGCCGGGCGT
TATGCCTATG CGGGACGCGA TTTTGTGGTG CAGCAGGTGC TCGACATTCT CGGCGCACAG
GTAACGGAAG AGGTTCACAA TCACCACAAC TACGCCTGGA AAGAAAAGGT GAACGGCGAG
GAGTTGATCG TTGTGCGCAA GGGCGCCACA CCTGCCTGGC CCGGTCAGCG CGGGTTCGTC
GGCGGTTCGA TGGGCGACAT TAGCGTGGTC GTCGAGGGGG TCGAGAGCGA CGAATCACGC
CTGGCGCTGC ACAGCACCAT CCATGGCGCA GGGCGCGTGA TGAGTCGCAT CCAGGCGGCT
GGCAAGCGGC GCTGGGTCCG GCGCAACGGA CGGCGGGTGC AGGAGGTCGT CAAACCGGGT
AAAATCTCCC GTGAAATGAT GCTCGAAGCA GTACGGCGCG CAGGGGTCGA ACTGCGCGGC
GGCGGTACAG ACGAAAGCCC GCACGTCTAC CGACCGCTGC AGGAGGTGCT GGCGCACCAC
GCCAACACTA TCAAGATCGT CCATACGCTC AAGCCGATGG GGGTGGCGAT GGCGGGTGAA
GATGTGTTCG ACCCCTACAA AGATTGA
 
Protein sequence
MFRMIDGIPV WGEHDEGTIE QIKRCASDRE AVKAALMADG HLGYSMPIGG VVAYRDAVSP 
SGVGYDISCG IKGVRTNLRA DDIRKDIKRI MDQVAREVVF GLGGTSGKAA DHPLFDDPTW
RDLPQVGKLR QLAREQLGTV GSGNHWVDIL EDEEGWVWVA AHFGSRGLGH RIASGFLNLA
HGKPFDAPAP GESMQQPATV ISLRSDLGQA YWQAMTLAGR YAYAGRDFVV QQVLDILGAQ
VTEEVHNHHN YAWKEKVNGE ELIVVRKGAT PAWPGQRGFV GGSMGDISVV VEGVESDESR
LALHSTIHGA GRVMSRIQAA GKRRWVRRNG RRVQEVVKPG KISREMMLEA VRRAGVELRG
GGTDESPHVY RPLQEVLAHH ANTIKIVHTL KPMGVAMAGE DVFDPYKD