| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4490 |
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| Symbol | |
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| ID | 5211475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5629319 |
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| End bp | 5630854 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640598069 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001278772 |
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| Protein GI | 148658567 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.30603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000741245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCCGCA GTATTCAGAA AACATGGCTT GCCATCCTGC TCCTGTTCGC ACTCCTGCCG
ATGCTCGCAG TCGGCGGCAT CCTCTCATGG ATGGGGGGCG ACCTTCAAAT CCGGCAGGCG
CAGAGCATCC AGGATCAGAT TGCGCTTCGC TCCGAGGCGC TCCTGGCGAA CTTTGTCGAG
GAAGCGCTGA TGGAGATGAA CATCCTGGTG CGTTCCCCTG GCTTCGTAAG CGGTTCGACA
GACCAGCGCC TGGAACTGCT TGCCCGGACG ATCTTTGAAC GCAATCTGTT CGAGAGCCTG
GCAGTCGTTG ATAACACCGG CATGGAGCGC CTGCACGTCG CGCGGATCGG TATAACTCCG
CCTGACCGGT TGACCAGCCG CGCTGCCGAT CCGCTCTTCA AAGCCGCAAT CGGCGCCGAA
CGACCGGTCT TCGATGACCT GCGCTTCAAT CCGCTCAGCC GGGAATTATC GCTGCCGATA
GCATTACCCT ATCTTCTCCC CGGCAACCCG CCCCAGGTTC TTATCGCCGA AGCGCGTATG
AACCGCGTGA TCGAACAGGT GGTCAACATA CCGGTCGGGG ACAGAGGAAC GGTGAGCCTG
CTTGAAAGTG ACGGGCGCGT GATCGCGCAT CGCAACCGCG ACCTGATCGG GCGCACGGTC
GCGCTGTCGG ACTGGAGCAC TGAACATCAG ACCATCGCCG GCACTGACGG AACGACGGTG
TTGATGATGC TACGCACATT CGAGATCGGC GACTATACGC TGGGCATCGC CGTCGAGCAA
CCGCTTGATG AGGTGTACCA ACCGGTCGTT CAGAACATGC TGGTCATAGC GACGTTGATC
GCTCTGATGA CGCTCGCCGC TATTGCGGGA AGCATCGGCA TTGTGCAGAC CATCACCCGC
CCGATCCAGC GTCTTGCTCA TGTGACCAAG GAGATCGGCG CCGGCGATCT CGCGCAGCGC
ATTCCTGTCA CGCGCAACGA CGAGATCGGC ATGCTCCAGC GCAACTTCAA CCGGATGGTA
GAAAACATTG TGGCGCAGCA AACGGCAATT GCTGAGCGGA ACAACGAACT TGAACAGAGT
CTTCAGGAGC AGCGCCGACT GTTTGAAACC GTTCAACAAC TCTCGATTCC GCTGCTGCCG
GTGTGGGAGG GAGTGATTGT TCTCCCCATC GTGGGTCATG TGGATGCGCA ACGGGGGCAG
GCTCTGCTCG ATGCGCTGTT GAAAGGGATT GCTGAGCGAC GTGCGCGGGT TGCCATTCTG
GACATCACCG GCATCGCTGT TGTCGATCCC GATGTCGTGG CGATCCTGAC GCGCGCGATG
CAGGCGGCAG CGCTGCTGGG AGCAACGCCA ATGCTGGCCG GCATCTCGGC GACCAACGCG
CATCTGATGG TGCAACAGGG GGTTGCTAAC CTGAATGTGG CGACGTATCG CAACCTGCAG
AGCGCTATTA TGGCGGCCAT TGAGTATGAC CGCACCAATG GAAACCTGAA AACCTCTACC
CTTTCAGAGC GACGGATGCG TCACTCCCCC TCCTGA
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| Protein sequence | MSRSIQKTWL AILLLFALLP MLAVGGILSW MGGDLQIRQA QSIQDQIALR SEALLANFVE
EALMEMNILV RSPGFVSGST DQRLELLART IFERNLFESL AVVDNTGMER LHVARIGITP
PDRLTSRAAD PLFKAAIGAE RPVFDDLRFN PLSRELSLPI ALPYLLPGNP PQVLIAEARM
NRVIEQVVNI PVGDRGTVSL LESDGRVIAH RNRDLIGRTV ALSDWSTEHQ TIAGTDGTTV
LMMLRTFEIG DYTLGIAVEQ PLDEVYQPVV QNMLVIATLI ALMTLAAIAG SIGIVQTITR
PIQRLAHVTK EIGAGDLAQR IPVTRNDEIG MLQRNFNRMV ENIVAQQTAI AERNNELEQS
LQEQRRLFET VQQLSIPLLP VWEGVIVLPI VGHVDAQRGQ ALLDALLKGI AERRARVAIL
DITGIAVVDP DVVAILTRAM QAAALLGATP MLAGISATNA HLMVQQGVAN LNVATYRNLQ
SAIMAAIEYD RTNGNLKTST LSERRMRHSP S
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