| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4489 |
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| Symbol | |
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| ID | 5211474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5628318 |
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| End bp | 5629322 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640598068 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001278771 |
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| Protein GI | 148658566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.311346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000667621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCATGTCA GGATGGTTCA ACTGCGGCTG ATGCTGCTGG TGCTGGCGCT GCCCGTTATG
CTTGCCGCCT GCACACAACC GACATCCTCG CCAGGCGGAG CCGGCGGCGA TGCTCCCCGC
CGGTGGCGTA TCGGCATGTC GCAGGCGAAC AACGCCGAAC CGTGGCACCA GGCGATGAAT
GCGCAGATCG CTGCGGCTGC CGCCCGTCAT CCCAACATTG AGATCGAGTT CACTGATGCG
CGCCAGAACA ATGCACAGCA GATTGCAGAC GTGGAAGCCT TCCTGAGCAA GGGTATCGAT
CTCCTCATCA TTTCGCCCAA CGAAGCCTCC CCGCTGACCC CGATTGTAGC GAGCGCATTT
CAGCGCGGCA TTCCGGTGAT CGTGCTGGAT CGCAAAGTGA AGGGCGAACA GTACACGATG
TGGATCGGCG CCGATAACCG CCTGATCGGG CGCAAGGCGG GCGAATATAC GGCGCGCTGG
TGCCGCGAAC AGCAGCGATC ACCGTGTACG GTCATCGAAC TGCGTGGACT GGAAGGCTCG
ACCCCCACGC AGGAGCGCGG CGACGGCTTC CGCGAAGGGA TCGCCGCCAA CCCGGATGTG
CGCATTATTG CCAGTCAGAA CGCCGACTGG CTCGCCGAAC GGGCTGACGC GCTTGCGCGC
GTTCTCTTTG AAGCAAACCC GGATGTCGAT GTGGTCTATG CCCACAACGA TCCTATGGGC
ATTGCCGCCT TCAATGTTGC AAAGGAGCAG GGGCGCGATA CCGACGCCAT CCTCTTTATC
GGCATCGATG CGCTTGCGAC CTCCGATGGC GGTATTCAGG CGGTGCGGCA GGGCAAACTC
AATGTGACAT ACGTCTATCC TACGGGCGGC GCCGAAGCCA TCGAATGGGC GCTGCGAATA
CTGGAACAGC GCGAGACGCC GCCGCGCGAA ATCATTCTCG ATACTGAAGA AGTCACCACT
GCCAACGCCG ATGCCATGTT CCAGAAATAC GGAGGCCGGG AATGA
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| Protein sequence | MHVRMVQLRL MLLVLALPVM LAACTQPTSS PGGAGGDAPR RWRIGMSQAN NAEPWHQAMN
AQIAAAAARH PNIEIEFTDA RQNNAQQIAD VEAFLSKGID LLIISPNEAS PLTPIVASAF
QRGIPVIVLD RKVKGEQYTM WIGADNRLIG RKAGEYTARW CREQQRSPCT VIELRGLEGS
TPTQERGDGF REGIAANPDV RIIASQNADW LAERADALAR VLFEANPDVD VVYAHNDPMG
IAAFNVAKEQ GRDTDAILFI GIDALATSDG GIQAVRQGKL NVTYVYPTGG AEAIEWALRI
LEQRETPPRE IILDTEEVTT ANADAMFQKY GGRE
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