Gene RoseRS_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4487 
Symbol 
ID5211472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5626387 
End bp5626623 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content41% 
IMG OID640598066 
Producthypothetical protein 
Protein accessionYP_001278769 
Protein GI148658564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00300962 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTTC ACACCTGGAA AGATTATGTG GCAAGCGTGA TTGCTGCTCT TGGCGGTAAG 
GCTCGGCTAT ATGAGATATA TGATTATGTC ATTTGCGAAA CTACACTAAG ACTACCAGAT
TCATGGCAAG CTATTATACG TTATACGATC TACATTCATT CGTCAGACTC TCGTGCATAT
AAGGGAGGTG AAGACCTATT TTACCGCTTA GATCGAGGAT ATTGGGGTTT AAGGTAA
 
Protein sequence
MEFHTWKDYV ASVIAALGGK ARLYEIYDYV ICETTLRLPD SWQAIIRYTI YIHSSDSRAY 
KGGEDLFYRL DRGYWGLR