Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4480 |
Symbol | |
ID | 5211465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5618349 |
End bp | 5618783 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640598059 |
Product | hypothetical protein |
Protein accession | YP_001278762 |
Protein GI | 148658557 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0120003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000591789 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCCTGTGT TCAAGGATTA TGCCGAGCTG CACTTATGCC TGAGCACGTT GTACGACAAG GCGAAGTGCG ATGCGCGCAT TGCGCCGAAA ATCCGCGACT CGCATCTGGT GATCCAGTTT CGCTATGAAG AACCGCGCGC TGTGGTGACC ATCAATGCGG CAGCGCCGCC AACGCAACCC GGTGCGTATT TCGATGTCCT GTGGGGCGAT GATACCGGAT TGAAGCCGGA TGTTGAGATG AGCATGAAGG CGGATATCGC TCATCAGTTC TGGCATGGCA AAATTAATCT GATGACGGCA TTGGCGCGAC GTCAGATTAT TGCAAAGGGT CCGATTCCAA AAATCTTGAA ATTGTTGCCT GCGGTTGAGC CTATGTACGA AATGTATCCA CGTCTGCTCC GCGAAATGGG GCGCGCAGAT CTGGTGTTGA CCTAG
|
Protein sequence | MPVFKDYAEL HLCLSTLYDK AKCDARIAPK IRDSHLVIQF RYEEPRAVVT INAAAPPTQP GAYFDVLWGD DTGLKPDVEM SMKADIAHQF WHGKINLMTA LARRQIIAKG PIPKILKLLP AVEPMYEMYP RLLREMGRAD LVLT
|
| |