Gene RoseRS_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4480 
Symbol 
ID5211465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5618349 
End bp5618783 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content53% 
IMG OID640598059 
Producthypothetical protein 
Protein accessionYP_001278762 
Protein GI148658557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000591789 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTGTGT TCAAGGATTA TGCCGAGCTG CACTTATGCC TGAGCACGTT GTACGACAAG 
GCGAAGTGCG ATGCGCGCAT TGCGCCGAAA ATCCGCGACT CGCATCTGGT GATCCAGTTT
CGCTATGAAG AACCGCGCGC TGTGGTGACC ATCAATGCGG CAGCGCCGCC AACGCAACCC
GGTGCGTATT TCGATGTCCT GTGGGGCGAT GATACCGGAT TGAAGCCGGA TGTTGAGATG
AGCATGAAGG CGGATATCGC TCATCAGTTC TGGCATGGCA AAATTAATCT GATGACGGCA
TTGGCGCGAC GTCAGATTAT TGCAAAGGGT CCGATTCCAA AAATCTTGAA ATTGTTGCCT
GCGGTTGAGC CTATGTACGA AATGTATCCA CGTCTGCTCC GCGAAATGGG GCGCGCAGAT
CTGGTGTTGA CCTAG
 
Protein sequence
MPVFKDYAEL HLCLSTLYDK AKCDARIAPK IRDSHLVIQF RYEEPRAVVT INAAAPPTQP 
GAYFDVLWGD DTGLKPDVEM SMKADIAHQF WHGKINLMTA LARRQIIAKG PIPKILKLLP
AVEPMYEMYP RLLREMGRAD LVLT