Gene RoseRS_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4479 
Symbol 
ID5211464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5617480 
End bp5618085 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID640598058 
Producthypothetical protein 
Protein accessionYP_001278761 
Protein GI148658556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00129482 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00060727 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAGCG AAGACATGTA TGAACGCGGT GTGGCTGATG CCGAGCGCGG CGAGTTGCAC 
CCGTTCTACT ACCAGCATTA CTACCATTAC CGCCGGGGTT ATGATCAGGC GCGGCGACGT
ATGCGTCGCA CCCCATTGTC GCTGCTGAGC AGGCGCGGAT GGTTGCTGAC AATTGGAGTC
GTGCTGGTCG TGGCGCTGGC AGTTGTGCTC GGTAGTGCGT TTCGCGGGAG TAATGCAGAG
GATCTGGCAT CGTTCGCAGC ACCTGAAGCG GAGACTGTTG CTGCGGAACC TGTGCAACCG
ACTCGCACGC CCCTCTTCCC TACGGCGGTT CCGAGCGCAA CACCTGCACC AATCGTGCGG
ACATTACGGG TTGGCGGGTC GGCGCAGGTG GCGAATACCG AAGGTCGCGC ACTGCGTGGA
CGCGCTGCGC CAGGGTTGAA GGCGCCGGTG CGTGTCGCCT TCGCAGAGGG AGAACAGGTG
CGCATCCTGG AGGGACCGGT AGCCGCCGAC GGATATGTGT GGTGGCGCGT CGAAGGTCAG
AAGGGTGCAG GATGGGCGGC GCAGCAATCG CTTGAGGGCG TCGTCTGGCT TGTGCCGGTC
GAGTAA
 
Protein sequence
MSSEDMYERG VADAERGELH PFYYQHYYHY RRGYDQARRR MRRTPLSLLS RRGWLLTIGV 
VLVVALAVVL GSAFRGSNAE DLASFAAPEA ETVAAEPVQP TRTPLFPTAV PSATPAPIVR
TLRVGGSAQV ANTEGRALRG RAAPGLKAPV RVAFAEGEQV RILEGPVAAD GYVWWRVEGQ
KGAGWAAQQS LEGVVWLVPV E