Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4479 |
Symbol | |
ID | 5211464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5617480 |
End bp | 5618085 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598058 |
Product | hypothetical protein |
Protein accession | YP_001278761 |
Protein GI | 148658556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00129482 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00060727 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAGCG AAGACATGTA TGAACGCGGT GTGGCTGATG CCGAGCGCGG CGAGTTGCAC CCGTTCTACT ACCAGCATTA CTACCATTAC CGCCGGGGTT ATGATCAGGC GCGGCGACGT ATGCGTCGCA CCCCATTGTC GCTGCTGAGC AGGCGCGGAT GGTTGCTGAC AATTGGAGTC GTGCTGGTCG TGGCGCTGGC AGTTGTGCTC GGTAGTGCGT TTCGCGGGAG TAATGCAGAG GATCTGGCAT CGTTCGCAGC ACCTGAAGCG GAGACTGTTG CTGCGGAACC TGTGCAACCG ACTCGCACGC CCCTCTTCCC TACGGCGGTT CCGAGCGCAA CACCTGCACC AATCGTGCGG ACATTACGGG TTGGCGGGTC GGCGCAGGTG GCGAATACCG AAGGTCGCGC ACTGCGTGGA CGCGCTGCGC CAGGGTTGAA GGCGCCGGTG CGTGTCGCCT TCGCAGAGGG AGAACAGGTG CGCATCCTGG AGGGACCGGT AGCCGCCGAC GGATATGTGT GGTGGCGCGT CGAAGGTCAG AAGGGTGCAG GATGGGCGGC GCAGCAATCG CTTGAGGGCG TCGTCTGGCT TGTGCCGGTC GAGTAA
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Protein sequence | MSSEDMYERG VADAERGELH PFYYQHYYHY RRGYDQARRR MRRTPLSLLS RRGWLLTIGV VLVVALAVVL GSAFRGSNAE DLASFAAPEA ETVAAEPVQP TRTPLFPTAV PSATPAPIVR TLRVGGSAQV ANTEGRALRG RAAPGLKAPV RVAFAEGEQV RILEGPVAAD GYVWWRVEGQ KGAGWAAQQS LEGVVWLVPV E
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