| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4477 |
|---|
| Symbol | |
|---|
| ID | 5211462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5614432 |
|---|
| End bp | 5615223 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640598056 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiX protein |
|---|
| Protein accession | YP_001278759 |
|---|
| Protein GI | 148658554 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00657988 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000679447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTG TTATTCTGGC AGGTCGAGGA CAGGCGGAAC CCCGAACGGG AGCGACGCTC
ATTCGTCTGG CGGCGCATTG CCGTAAGGCC GGTGTTGCCT CTATCGTTGC CGCTGGATTT
CTCCAGCATC AGCGCCCTTC CTTTGGTGAA GCGCTCGAAC AGTGCGTTGC CCGGGGCGCC
CGGGAGGCAG TCATTGTGCC GTACACACTG TCACTGGCGA AGGAGGACTG GGCGGATCTG
GAACGCACGG TGCAACGCGC GCGCCAGGTT TACCCGCACC TCGCGCTGCG TATCGCTGAG
GCGCTTGGGC ATCATCATGC GTTGATAGAG GTGCTCATCC AGCGTGTGAT CGAAGCCGAT
TATGTGGCAG CGCATCATAT GCATCATGGT CGCCTCACCT GGCCCGGATG GCAGAAGCAG
CGCGCAATCG GATTGCTGAT CGTCGGGAAA GGGCTGCCAG ACATCCCTGC GCCTCTGGAA
GAAGCGATAA CCACGTGTTG CCCGACTGCG ACACGGTACA CTGCTGTGCG CTTTTACGCT
GCCGATCAGG ACGGGGAAAC CCTGAAATCA TCCCTCCAGG CGCTGATTGC GCAGGGTTGC
CAGGCGATCA TCGTTGCGCC ATACGCTCTG GAGCGATGTA GGATGACAGC GCCTGTCATC
GAGCGCGCCA TCGCCTGCGT ATCTGCCAGA TACCCTGAAG TGACCATTAT TCAGGCGGAG
CCTCTGGCGT ATGATCGCCG GTTGATTACA GCAATCGCCG ACCGGGTGCG CGCTGCAATC
GATGTGTCGT AG
|
|---|
| Protein sequence | MRAVILAGRG QAEPRTGATL IRLAAHCRKA GVASIVAAGF LQHQRPSFGE ALEQCVARGA
REAVIVPYTL SLAKEDWADL ERTVQRARQV YPHLALRIAE ALGHHHALIE VLIQRVIEAD
YVAAHHMHHG RLTWPGWQKQ RAIGLLIVGK GLPDIPAPLE EAITTCCPTA TRYTAVRFYA
ADQDGETLKS SLQALIAQGC QAIIVAPYAL ERCRMTAPVI ERAIACVSAR YPEVTIIQAE
PLAYDRRLIT AIADRVRAAI DVS
|
|---|
| |