| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4475 |
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| Symbol | |
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| ID | 5211460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5612779 |
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| End bp | 5613600 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640598054 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001278757 |
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| Protein GI | 148658552 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000552793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGCCGA TCAACCGCGT GAAACAGGCG CTCAAAGCCG GACAGCCGGT GTACGGAACC
ATGCTCGTCG AGAGTGCATC CACAGCATAT GTCATGATGC TGGCGCACGC CGGGTACGAC
TTTGTGTTCA TCGATATGGA GCACGGCGTT TACGATCTCG GCGTGGTCGC TGAAATGATC
AGGGTGGCGC GCCTGACCGG TCTCACGCCA CTGGTGCGGA TTCCCGACCT GGCATATGAT
CTCGTGGCGC GCACCCTGGA TGCCGGTGCG ATGGGCATCA TGCTTCCGCG CGTCGAGACT
GTCGAACAGG CGCAGACGCT GGTCAGGTAC GCAAAGTACC CGCCGGAGGG TGTGCGTGGA
GCAGCTGCCG GTCGTGGTCA CACCGACTAC CGCGGCGCCG CGCCACGCGA TCTGGTGCGT
CACATGAATG AGCATACGCT GGTCATTCTC CAGATCGAAC GGGAGGCTGC CGTGCAGCGC
ATCGATGATC TGTTTGCTGT GCCGGGCGTC GATGCCGGGC TGATCGGACC GTTCGACCTT
ACGATCTCGC TGGGGGTGGA GAGCGTCACC GCGCCGGAAG TTGAGTCGGC AATCGCACGG
GTGCTGGACG CCGCGCAGCG TGCTGGCGTT GCATGTGGCA TCCACAGCAG TGACCCACAG
CAGACGGCTG TGTGGCGAGC GCGCGGTATG ACTCTGCTGA TGAGCGGCAG CGATGCACAA
TTCTTCAGCG CAGGAGCGCG TCAGGCGCTT GCGGCAATGC GCCAGGATCA TCCACACTCC
AGCAGTCCTG TCGACCCAAC CGGTGAGCCT GGAGCGGTGT AG
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| Protein sequence | MLPINRVKQA LKAGQPVYGT MLVESASTAY VMMLAHAGYD FVFIDMEHGV YDLGVVAEMI
RVARLTGLTP LVRIPDLAYD LVARTLDAGA MGIMLPRVET VEQAQTLVRY AKYPPEGVRG
AAAGRGHTDY RGAAPRDLVR HMNEHTLVIL QIEREAAVQR IDDLFAVPGV DAGLIGPFDL
TISLGVESVT APEVESAIAR VLDAAQRAGV ACGIHSSDPQ QTAVWRARGM TLLMSGSDAQ
FFSAGARQAL AAMRQDHPHS SSPVDPTGEP GAV
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