Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4471 |
Symbol | |
ID | 5211456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5607007 |
End bp | 5608140 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598050 |
Product | hypothetical protein |
Protein accession | YP_001278753 |
Protein GI | 148658548 |
COG category | [C] Energy production and conversion |
COG ID | [COG3474] Cytochrome c2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.181787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000989669 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGACATG CGGCAAAGGT GTTGATCCTC TGGTTGATCC TGCTTGCCGG ATGCGGTGCG GTTGCCAACC AGATGGCGCC TGGCGCCCCG AACGCCGCAG TTCCTGAGTC GAGTCCATCA CCGGTGGCGC AACCAACCGG CGATCCGCAG CGCGGTGCAG CGATTTTTGT CGGTGATGTC ACGATCGCTG GCTTCGTCGC CTGTCGTGGA TGTCATTCCG TCGATCCGGC TGCCGGTGAC GGTATCGGAC CGAACCTGGC AGGTATTGCG CTCCGCGCTG GCTCACGTAT GCCTGGCGTC CCGGCTGACG ATTATATCCG ACGGTCGATC CTGGTGCATG ACGATTATGT TGTACCGGGG TTCGAGGCAG GACTGGCGCG CGGGGTGGTG GGGCGCGATT TTGCGGAGAT ATTGAGTGCG CAGGATGTTG CCGATCTGAC CGCGTATCTG CTGACCCTCG ATCAGACGAC GGTTGCACAG GCGCCCACGA TGCCGCCATC TTCCCCGACA TCATCACCAA CACAACCTTT GCCAGCGGCA TCGGAAACCG TCACCCCTTC ACCAACGCTC TCAGCAACGG TCGAACCATC GCCTGGAGGA TTGTCGCCAA CCCTTCCCGC TTTGCCGTCG CCCGACAATC GCACCGCAAC AGCGACCGGC AGTTCATTGT CGCCAACCCC TCCTGCTTCA CCATCGACCG ACAATCGTAC CACAACAGCG ACCAATCCGA CGAACGCTCC ATCCACGCCG CAGGGGACAC CCGAACCGGC AACAGTATCA CCCACCGCCG TAACACCGAC GATCCCGCCA TCGCCAACCG GAGCGGCGCC TCCGACCGCT GCGCCGGCGC CGACGCAACC ACCGTCGCCG GTGGCGACCA CGCCTGTCGC CAATCAGGAC GAGCCGCTTC CCGAAGAACT GCGGGTTTTC ACAGGATGCA TGACCTGTCA TGACCAGCAC GCGCAGAGTA TCGTTCGGAT GCCGCATGTG CGCTTCCCAA GATGTTCCGC ATGCCACAGC GGTTCGCCTT CCCGCGTCGG ATGCCCGACC TGCCATAGCA TGCACCGCAT TCAGGCGCCC CATGGCGGCG AAAACCCAAA CCTGCCGTGC AGTCACTGCC ATACGGACAG GTGA
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Protein sequence | MRHAAKVLIL WLILLAGCGA VANQMAPGAP NAAVPESSPS PVAQPTGDPQ RGAAIFVGDV TIAGFVACRG CHSVDPAAGD GIGPNLAGIA LRAGSRMPGV PADDYIRRSI LVHDDYVVPG FEAGLARGVV GRDFAEILSA QDVADLTAYL LTLDQTTVAQ APTMPPSSPT SSPTQPLPAA SETVTPSPTL SATVEPSPGG LSPTLPALPS PDNRTATATG SSLSPTPPAS PSTDNRTTTA TNPTNAPSTP QGTPEPATVS PTAVTPTIPP SPTGAAPPTA APAPTQPPSP VATTPVANQD EPLPEELRVF TGCMTCHDQH AQSIVRMPHV RFPRCSACHS GSPSRVGCPT CHSMHRIQAP HGGENPNLPC SHCHTDR
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