| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4460 |
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| Symbol | |
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| ID | 5211445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5595451 |
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| End bp | 5597886 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640598039 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001278742 |
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| Protein GI | 148658537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0202939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACGCT ACGTTTGCAT TCATGGACAT TTCTACCAGC CGCCGCGAGA AAATCCGTGG
CTTGAAACTA TAGCGCCCCA ACACTCAGCC CATCCATACC ATGACTGGAA CGAGCGCATC
GCCGCCGAAT GCTACACGCC CAACACGGCG TCGCGCATTC TTGATGGCGA CGGTCGGATC
ATTCAGATCG TCAACAACTA CAGTCGAATC AGTTTCAACT TCGGTCCCAC CCTGCTCGCC
TGGCTCGAAA AGTACGTTCC TGCAACATAT CACGCGATCA TCGAGGCAGA CCGGCAGAGC
AGGACGCTCT TCGCCGGTCA TGGGTCTGCC ATCGCACAGG CGTACAACCA TATGATCATG
CCGCTGGCAA ACCGGCGCGA TAAGCGGACG CAGGTAATCT GGGGGATCCG TGACTTTGAG
CGCCGCTTTG GACGGATGCC GGAGGGTATG TGGCTCCCGG AAACAGCCGT CGATATCGAA
ACGCTCGAAA CGCTGGCGGA GTGCGGTATT CGCTTCACCA TCCTGTCGCC CTATCAGGCG
CGCGCCGTTC GGAAGATTGG CGCAACGACC TGGCAGGATG CGAGCGGCGG AAAAATTGAT
ACGACGATGC CGTATCTTCA GCATCTGCCG TCGGGACGCA CAATTGCCAT CTTTTTCTAC
AATGGTCATA TCTCGCGCGC AGTCGCATTC GAGGGATTGC TCTACAATGG CGACAACTTC
GCCCATCGCC TGATCGGCGG GTTCCACGAG CGCATGGGAC CGCAACTGGT GCACATTGCT
ACCGATGGTG AGACCTACGG ACACCACCAT CCCCGCGGTG ATATGGCGCT GGCATATGCG
CTCCACTATC TCGAACGCGA GCGCCTGGCG CGTCTGACAA ACTATGCTGC GTTTCTGACC
CTTCATCCAC CAACGCACGA AGTGCAGATC GCTGAACGCA CCTCGTGGAG TTGCTTCCAC
GGTATCGAGC GCTGGCGAAG CGACTGCGGT TGCAGCACCG GAGGGCGCGA GGGATGGAAG
CAAACCTGGC GTGCGCCGCT CCGTGCCGCG CTCGACTGGT TGCGCGATAC CCTCGCAGCG
CGGTTCGAGA CTGCCGCCGA GCGATTGCTG TTCGATCCAT GGACTGCGCG TGACGACTAC
ATCCGTGTTG TGCTCGACCG ATCACCTGAG TCGGTTAATG CGTTCCTTGC CGAGCATGCG
ACCCGTGAAC TGAACACCGA AGAACGGATC GAAGTGTTGC ATCTGCTTGA GATCCAGCGC
CAGGCAATGC TGATGTACAC CAGTTGCGGC TGGTTCTTCG CCGAACTATC GGGGATTGAA
ACGGTCCAGG TGCTGCACTA CGCCGCGCGC GCAATTCAGC TTGCACGTGC GCTCGACGGC
GACGATCTGG AACCAGAGTT CCTGCGGCGG CTTGCGGAAG CGCCCAGTAA CATACCGCAG
TTTGTCAACG GTCGCGGCGT CTACGAACAA CTGGTTCTGC CGCACGTGGT CGACCTGCGC
CAGGTGGCGG CGCACTATGC CGCGACGTCG CTGTTCAACA TCCAGACCGA TCCACAGCGG
GTCTACTGCT ACACCGTCGA GCAGCGACGC CACCGGGTAA TGGAAGCCGG GCATGCAAAA
CTGGCGCTGG GAGTGGCGCG AGTCACATCA ACGATTACGC TCGAATCGGC GGAACTGCGT
TACGGCGTGC TGCATCTCGG CGACCAGAAC CTGATCGGCG CCGTGCGCAC CGAGGATGGC
GCTGAGAGTT ACGCCGATCT GCTGCACACC ATTTCGCCAG CGTTCGAACG CGCCGATCTC
GCCGACGTTG TGCAGACGCT GACGCGGCAT TTCGGGCGCC TCGATTACTC GCTCAAGTCG
GTCTTCTATG ATGAACAGCG GGCTATTGTT CGGGCGATCC TGGCGCCCGC CCTCGAAGAG
ACTGCCGCTG CCTACCAGCG GCTCTACGAC CGCCATACGC CGCTGATTTC GTTCCTGACC
AACCAGGGCA TCCCGCTGCC GCCCGAAGTC GCCACAGCCG CGGAGTACGC CATGAGCATG
GCGATCTATC GGGCGCTCAC GGCAGACCCT CCCGACTTCG AGCGGGCGCG GTCGTTGATC
GACTCGGCGC ATCGCGCGGG GGTGTCGCTG GCGCGTGAGC CGCTGATTGG CGAACTGCGC
CGCTCCATTG AACAGGTAAC TGCGCGTCTC CTGACCGATC CGGAGTCGTC CGTACTGTTC
GACCGCCTGT TGAATCTGGC GCGGTTGGTG CGCGCGCTGC CCTTTGCGAT CGATCTGTGG
CGCGCCCAGA ATGATGTCTT CGCCATCCGC GCAACCCACT ACGCCGAACT GGCAGCGCGC
GCACGCGCAG GCGATCAGCG CGCACGAATC TGGACGGAGC GTTTTGCGAC CGCCGCAACC
CTGCTCGGCA TCAGTATGTC CGGGTATGGT CGATAA
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| Protein sequence | MERYVCIHGH FYQPPRENPW LETIAPQHSA HPYHDWNERI AAECYTPNTA SRILDGDGRI
IQIVNNYSRI SFNFGPTLLA WLEKYVPATY HAIIEADRQS RTLFAGHGSA IAQAYNHMIM
PLANRRDKRT QVIWGIRDFE RRFGRMPEGM WLPETAVDIE TLETLAECGI RFTILSPYQA
RAVRKIGATT WQDASGGKID TTMPYLQHLP SGRTIAIFFY NGHISRAVAF EGLLYNGDNF
AHRLIGGFHE RMGPQLVHIA TDGETYGHHH PRGDMALAYA LHYLERERLA RLTNYAAFLT
LHPPTHEVQI AERTSWSCFH GIERWRSDCG CSTGGREGWK QTWRAPLRAA LDWLRDTLAA
RFETAAERLL FDPWTARDDY IRVVLDRSPE SVNAFLAEHA TRELNTEERI EVLHLLEIQR
QAMLMYTSCG WFFAELSGIE TVQVLHYAAR AIQLARALDG DDLEPEFLRR LAEAPSNIPQ
FVNGRGVYEQ LVLPHVVDLR QVAAHYAATS LFNIQTDPQR VYCYTVEQRR HRVMEAGHAK
LALGVARVTS TITLESAELR YGVLHLGDQN LIGAVRTEDG AESYADLLHT ISPAFERADL
ADVVQTLTRH FGRLDYSLKS VFYDEQRAIV RAILAPALEE TAAAYQRLYD RHTPLISFLT
NQGIPLPPEV ATAAEYAMSM AIYRALTADP PDFERARSLI DSAHRAGVSL AREPLIGELR
RSIEQVTARL LTDPESSVLF DRLLNLARLV RALPFAIDLW RAQNDVFAIR ATHYAELAAR
ARAGDQRARI WTERFATAAT LLGISMSGYG R
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