| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4453 |
|---|
| Symbol | |
|---|
| ID | 5211438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5583815 |
|---|
| End bp | 5584654 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640598032 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001278735 |
|---|
| Protein GI | 148658530 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.522171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA TCCATATCGA CAACCGATTG GTGCACTATG AGGTCGTCGG TCGGCGCGGC
GCACCGGTGA TCTTTCTGCA CAGCTGGCTT GGCTCGTGGC GCTACTGGCT GCCGACGATG
GAGCATGCGT CGGAACGCTA CCGAACGTTC GCTCTCGATT TCTGGGGGTT CGGCGAGTCT
GACCGACGTG ATGGAGCGTT TTCAATCGCC GAGTATGTCG GCATGGTGAT AGACTTTATG
AACCACCTTG GCATCGCAAA AGCGACCCTG GTGGGGCATG GATTGGGCGG CATGGTAGCG
CTGCGCGCCG TAAGTCAGCA TCCGGATCGG TTCACGCGCC TGATGATCGT CAGTACGCCA
ATCCAGGGTG CGCAGATTCA GAACCACGTC AAGCCGGGCG CCCTGTCACG CCTCCTCGGA
CGCGCCGCCC CTGGCAATGT CTGGACGCGG TTGATGCGTC AACTCAATGT CGATTATCCG
CAGATCCTGA ACGAGATTAT CGAGGACACC GATAGCCTCT CCGAAACGGT TGTTCAGCGT
GTCATCGCGT CGGTTGCCGA GACCGATCTG CGCGAAGACC TCGAACGGCT GGAGACGCCG
TTGCTGGCGG TGTTCGGCGA GAAGGATGCG ATCGTGTCGC CTGATCAGGC GCGCTTCCTG
CACGAAGACC ATGCCTCAAT GCAACAGGTT ATCAAATTGC CGCGATCCAA CCATTTTCCC
TTCCTCGATC AACCGAATGT GTTCAACCGC CTGTTGATGG ATTTCCAGGC GAGCAATGGA
ACGCAGGTGG AGATCAAGAC GGAGTGGCGG CGGCGGGTGA GTCAGCTGGA GTATATTTGA
|
|---|
| Protein sequence | MSAIHIDNRL VHYEVVGRRG APVIFLHSWL GSWRYWLPTM EHASERYRTF ALDFWGFGES
DRRDGAFSIA EYVGMVIDFM NHLGIAKATL VGHGLGGMVA LRAVSQHPDR FTRLMIVSTP
IQGAQIQNHV KPGALSRLLG RAAPGNVWTR LMRQLNVDYP QILNEIIEDT DSLSETVVQR
VIASVAETDL REDLERLETP LLAVFGEKDA IVSPDQARFL HEDHASMQQV IKLPRSNHFP
FLDQPNVFNR LLMDFQASNG TQVEIKTEWR RRVSQLEYI
|
|---|
| |