Gene RoseRS_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4448 
Symbol 
ID5211433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5572345 
End bp5573631 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID640598027 
Productglycosyl transferase, group 1 
Protein accessionYP_001278730 
Protein GI148658525 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG TGATGCTTGC TCCATTTGGC ATCCGCCCGA AAGGGACGCT GGCGGCGCGT 
ATGTTGCCGC TGGCGCAGGC GCTCGTGCGA CGCGGACATC AGGTGGTCAT CGTTGCGCCG
CCGGTGCATA ACCCCGATGA TGCTGCAACG TGCGTCGAAT ATGAGGGAGT GCCGGTGATC
CATACTGCCG CGCCGCGAGC GCCAGGCGTG GCGCAGCAGA CGCTGGCGCT GCTGCAAGCG
ACGCTGCGGC AACGTCCTGA TGTTGTGCAT CTCTTCAAAC CGAAAGGGTA CGCTGGTCTG
GCGGCGCTGG CGCTGCATCA CCTTCGTCCG GCGCTGCCGC TGGTGGTGGA TACCGATGAT
TGGGAGGGTC CCGGCGGCTG GAATGATCTG CTCCCCTATC CATCAGCGGC GAAGCGGCTA
TTTGCCTGGC AGGAGCGCGA TCTGCTGCGT CGCGCTGACG CAATCACCGT TGCCAGTCGC
GCACTCGAGA CGCTGGTGTG GAGCATGGGC ATCGCGCCTG ATCGCGTCTT CTACCTCCCC
AACGGCGTCA GACCCTCAAC CCTCAACCTT CAACCCTCAA CCTTCAACCT TCAACCTTCA
ACCCTCAACC TTCAACCCTC AACCTTCAAC CCTCAACCTT CAACCCTCAA CCTTCAACCC
TCAACCTTCA ACCCTCAACC TTCAACCTTC AACCTCCTCC TCTACACCCG CTTCTGGGAA
CTCGATGTGC GCGAGGTCGT TGCGGCGCTG GTCGGGGTTG CCGCCCGTTG CCCGAATGTG
CGCCTGATTA TCGTCGGCAA GGGCGAACGT GGCGAGGAGA ACGAGTTGCT GCGACTGGTT
CAACGTACCG GTCTCGCTTC CTTCGTCGAT TATCGTGGCT GGTTGATGCC GGATCACATC
CCGGCGACGC TGGCAGAAGC CGATGTCGCG CTTATGCCGA TGCGGGATAC GCTGATCAAC
CGTGCACGCG GTCTGGCAAA ACTGCTCGAA TTGATGGGCG CCGGTCTCCC GATTGTCGCC
AGTCGGGTGG GGCAGGCAGC CGAATATCTG GAGCACGGGG TCAGTGGCTG GCTTGTGCCG
CCGGAGAATC CTGGGGCGCT GGCGGAGGCG GTGCTGCGAC TGATCGGCGA TGCAGACCTG
CGACAACGCC TGGGCATTGG TGCGCAGTAC GCTGCCCGGC AGTACTCCTG GGACCTGCTT
GCCCCAATCG CTGAACGGGC GTATGCGCAG GCGGTGAATC AGTCTTATTA TCAATTTGAC
TCCATGTCGA TCAATCGCAT ACCCTGA
 
Protein sequence
MRIVMLAPFG IRPKGTLAAR MLPLAQALVR RGHQVVIVAP PVHNPDDAAT CVEYEGVPVI 
HTAAPRAPGV AQQTLALLQA TLRQRPDVVH LFKPKGYAGL AALALHHLRP ALPLVVDTDD
WEGPGGWNDL LPYPSAAKRL FAWQERDLLR RADAITVASR ALETLVWSMG IAPDRVFYLP
NGVRPSTLNL QPSTFNLQPS TLNLQPSTFN PQPSTLNLQP STFNPQPSTF NLLLYTRFWE
LDVREVVAAL VGVAARCPNV RLIIVGKGER GEENELLRLV QRTGLASFVD YRGWLMPDHI
PATLAEADVA LMPMRDTLIN RARGLAKLLE LMGAGLPIVA SRVGQAAEYL EHGVSGWLVP
PENPGALAEA VLRLIGDADL RQRLGIGAQY AARQYSWDLL APIAERAYAQ AVNQSYYQFD
SMSINRIP