Gene RoseRS_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4430 
Symbol 
ID5211415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5551631 
End bp5552713 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content61% 
IMG OID640598009 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001278712 
Protein GI148658507 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.684374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.566503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CACTCACCAT CGTCACCATC GTCGGCGCAC GCCCGCAATT TATCAAGGCT 
GCCGCCATCA GTCGCGTCTT GCGGCAACGT CATCGTGAAG TGCTGGTGCA CACCGGGCAG
CACTACGACG CCAGCATGTC GGCAGTATTC TTTCAAGAAC TGGATATCCC TGAACCGGAT
GTGAATCTGG CGGTCGGTTC GGCGAGCCAC GGAGCGCAAA CCGGCGCAAT GCTGGCGGGG
ATCGAAGAGG TGTTGCTGGC GGAACGTCCC GACTGGACGC TGGTCTACGG CGACACCAAC
TCAACACTTG CCGGCGCGCT GGCTGCGGCA AAGTTACACA TTCCAGTCGC CCACGTTGAA
GCCGGTCTGC GCAGTTTCAA CCGCGCTATG CCGGAAGAGA TCAACCGGGT TTTGACCGAT
CATGTCTCCG ATCTCCTTCT CTGCCCGAGC CAGACGGCGG TCGATAACCT GGCGCGCGAA
GGGATCACCC ACAGGGTTGC GCTGGTCGGC GATGTGATGG CGGATGTGCT GCGCCTTGCG
GTTGAACGGG CGGATGCCGC TCTGCCGGAC ATACCGGGCG TGGAATCCGG CGCCTATGCC
CTGGCGACCG TTCATCGCGC CGAGAATACT GACGATCCGG CGCGTCTGCG CGGTATTTTG
ACCGGTCTCT CATCGCTTGA GATGATGGTC ATCTTCCCTG TGCATCCACG TGCACGCCGC
GCCATTGCCA CGATTGGATG GACGCCCCCG GATCATGTGC GTCTGATCGA ACCGGTTGGC
TACCTGAGTA TGGTTGCGCT TATGCGCAGC GCGCGCGTCA TCCTGACCGA TTCGGGCGGT
GTACAGAAAG AAGCGTACTG GCTGGGAGTC CCGTGTGTCA CGTTGCGTGA TGAGACGGAG
TGGGTCGAAA CAGTGACGCA TGGATGGAAT ACCCTGGTCG GCGCCGATCC TGAACAGATC
GTTGCTGCAG CGCGGCAACC ATACCCGTCG ATGCCGCGTC CGCCGCTCTA TGGCGATGGT
CACGCGGCTG AGCGGTGCGT GGCAGCGCTG GAGGGGGTGG GAAGGTTGAA GGTTGAAGGT
TGA
 
Protein sequence
MSKPLTIVTI VGARPQFIKA AAISRVLRQR HREVLVHTGQ HYDASMSAVF FQELDIPEPD 
VNLAVGSASH GAQTGAMLAG IEEVLLAERP DWTLVYGDTN STLAGALAAA KLHIPVAHVE
AGLRSFNRAM PEEINRVLTD HVSDLLLCPS QTAVDNLARE GITHRVALVG DVMADVLRLA
VERADAALPD IPGVESGAYA LATVHRAENT DDPARLRGIL TGLSSLEMMV IFPVHPRARR
AIATIGWTPP DHVRLIEPVG YLSMVALMRS ARVILTDSGG VQKEAYWLGV PCVTLRDETE
WVETVTHGWN TLVGADPEQI VAAARQPYPS MPRPPLYGDG HAAERCVAAL EGVGRLKVEG