Gene RoseRS_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4425 
Symbol 
ID5211410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5545386 
End bp5546174 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID640598004 
Productmethyltransferase type 11 
Protein accessionYP_001278707 
Protein GI148658502 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.102836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.287125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCACA ATGATTACTA CGCAAATTTT GGAGACATGT CAGTAGAAGA ATACGTGGAC 
TTTTTTCTCT CTACTGGTCA GTTAGAGCGA ATTGATCAAA TTATTGATAT GATTCCACAG
GATGTAGAAT CTGTTTTGGA TGTAGGCGCT GGTTTTGGAC ATCTTCTTGA GACTGCTTGG
CGAAAGCGTG GTATAAAGGG AGTTGGTATC GAGATAACAG ACTCGAAGAT AGAGTATGCT
AAAAGACATG GTATCGATAT GCGTAAGGGC GAAGCATCTG CTCTTCCGTT TCCAGACAAA
AATTTCGATC TTGTTGTTTC ATGCGAGGTT ATAGAACATC TTCCTTATGG TTCATATGAA
AAAGCACTTT CTGAGTTTGA AAGAGTATCC AAAAGGTATA TACTTATCGA GGTACCTTTC
GATGAGAAGC GGAGGTTTGT CAAGTGTCCT TACTGTGGTG CGACTTCCCA TCCTTGTTAC
CATATGAGGT CATTTCGAGA TGATAACATG GTAAAACTTT TCCCCAATTC AAGGTTGATT
GGGACTAAGA AAATAGGTGA AAGATCTGAG TTGCACTTCG AGGGTTTTTT GTCTAAATTT
CCCATCCGTT CGTGGCCTCC TTTTATGGTT TGTCCATCGT GCGGCTATAG ATTGCATCAG
GTTCCGAGGG ATGCTATTTA TCAGAATAGG ACGAGCCAAA GTGTCAGGAA TTATCTAAAG
AAAATATTAC TGTCGATTCT TGGTAGAAAG GTGCCTTTAT CTATCTTAGG GCTTTATTCT
GTCGATTAA
 
Protein sequence
MYHNDYYANF GDMSVEEYVD FFLSTGQLER IDQIIDMIPQ DVESVLDVGA GFGHLLETAW 
RKRGIKGVGI EITDSKIEYA KRHGIDMRKG EASALPFPDK NFDLVVSCEV IEHLPYGSYE
KALSEFERVS KRYILIEVPF DEKRRFVKCP YCGATSHPCY HMRSFRDDNM VKLFPNSRLI
GTKKIGERSE LHFEGFLSKF PIRSWPPFMV CPSCGYRLHQ VPRDAIYQNR TSQSVRNYLK
KILLSILGRK VPLSILGLYS VD