| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4417 |
|---|
| Symbol | |
|---|
| ID | 5211402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5537513 |
|---|
| End bp | 5537926 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640597997 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278700 |
|---|
| Protein GI | 148658495 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.126362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGAC CCGACGTCAT CCGCAAGAGG CTGGAGAAAC TGGATAAGTA TCTGGCTATT
CTCCGCCAGT TGCAAAAGTA TTCGTATGAT GAGTTTGTCA GTAACCCGGA GCGATACGGG
AGTGCAGAGC GCTTTCTTCA ACTGGCTATC GAATCGATCA ACGATCTGGG CAATCACGTT
GTGGCCGAAT CGGGGCTGGG AAATGTTGAT TGGTATAGCG ATATCCCTCA TCGATTACGT
GAAGGTGGAT TGATAGACGC ATCCCAGGAG GAAACCTGGA TTAAGATGAT CGGTTTTCGC
AATATCCTCG TCCACGACTA TCTAAAGATC GATAGAAGCA TTGTTTTTCG GGTCTTGCAG
GAAAATATCG ACGATCTTGA AACATTCCAG CGGATATTCG CACGGTTCCT GTGA
|
|---|
| Protein sequence | MVRPDVIRKR LEKLDKYLAI LRQLQKYSYD EFVSNPERYG SAERFLQLAI ESINDLGNHV
VAESGLGNVD WYSDIPHRLR EGGLIDASQE ETWIKMIGFR NILVHDYLKI DRSIVFRVLQ
ENIDDLETFQ RIFARFL
|
|---|
| |