Gene RoseRS_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4399 
Symbol 
ID5211384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5515212 
End bp5516138 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content62% 
IMG OID640597979 
Producthypothetical protein 
Protein accessionYP_001278682 
Protein GI148658477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCC AACCCCACAC CGGTTATACG CTCAGTGCGC TCGCAGCGGT CGTCTGGGCA 
TCGACAGCGC CTGGTCTGGC GTACCTCATG ACACAGTATG CAACTCCTGG TTTGACGCTG
GCGCTCTGGC GCGATCTGCT GATCGCGCTG GTTTGCGGCG GCGGGCTTCT GGCATTCCGT
CCTTCGCTCT TGCATATCGG CAGGCGCGCC GTCGGACATC TTGCGTTGAC CGGGATGGTC
TCCATCGGCA TCTACCACGC TCTCTGGCTC TGGTCGGTGA CTCTGAACGG TGCGGCGATT
GCCGTTGTGT TGATCTACAC CTATCCCGCA TTTGTCACGC TTGGCGCGTG GGCGCTGTTT
CGCGAACCGA TCAAGAAGGT GCATCTGGCA GCGCTGGCGC TGGCGCTGGC AGGGTGCGCG
CTCGTTGTCC GCGCGTATGA TCCTGCGATC CTGCGGATCA GCTGGCTGGG CGCGATGGTC
GGCTTGCTGA CTGCGCTGAC CCATACCGTC TATGTGCTGG TTGGTCAGCG CAATGCACCG
TCCATCAGTC CGTGGGCGAC ACTGGCATAT ACGATGACCT TCGGCTCGCT CACGCTCCTG
GCGCTGGCGC TGGCAGCCGA TCAACTCGCT CCAATGACGC GATCGTATAT CTGGGCAATC
GAGACCCCGG CAGCCTGGGC GATCCTGGCA ATCATTGCTA TCGGTCCAAC CCTTGGCGGG
TATGCGCTGT TCACCCTTTC GTTGCGTCAC ATTCCAGGGA AGGTCGCCGG ACTGATCTCA
GTGATCGAAG CGCCGGTTGC GACACTCATC GCCGTCACAT TGCTCGGCGA GCGCCTCGAA
GCTCTGCAAA TCGCAGGGAT GGGCATGATC CTGGTTGCCG TTGTTCTGCC GCGACTGGTG
GCGCAGATTG AAGGCGCGCC ACAATAA
 
Protein sequence
MQPQPHTGYT LSALAAVVWA STAPGLAYLM TQYATPGLTL ALWRDLLIAL VCGGGLLAFR 
PSLLHIGRRA VGHLALTGMV SIGIYHALWL WSVTLNGAAI AVVLIYTYPA FVTLGAWALF
REPIKKVHLA ALALALAGCA LVVRAYDPAI LRISWLGAMV GLLTALTHTV YVLVGQRNAP
SISPWATLAY TMTFGSLTLL ALALAADQLA PMTRSYIWAI ETPAAWAILA IIAIGPTLGG
YALFTLSLRH IPGKVAGLIS VIEAPVATLI AVTLLGERLE ALQIAGMGMI LVAVVLPRLV
AQIEGAPQ