| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4396 |
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| Symbol | |
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| ID | 5211381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5511443 |
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| End bp | 5511853 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597976 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001278679 |
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| Protein GI | 148658474 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.300415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC TGACACCTGA TCTTGCCGAT CTCCTCGCTG TCGCTGCCGC TGCGCGCCAA
CGGGCGTACT GCCCATATTC ACGGTTCGCC GTTGGCGCTG CGGCGCTGAC GGCGTCGGGA
GTGACGTTTC CCGGATGCAA CATCGAAAAC GCTGCGTACC CATCGACGAT CTGCGCCGAA
CGGGTGGCGT TGTTCAACGC CTACGCTGCT GGCGAACGCG AGATTGTCGC GCTGGCAGTG
ATCGCCGACA CGCCTGGACC GGTGAGTCCC TGTGGCGGGT GCCGTCAGGT CATCTTCGAA
CTTGCGCCGC GCGCCATTGT GGTCATGGCA AACCTGCGCG GCGCGTGGCG CGTGGCATTG
ATCGGCGAGT TGCTGCCTGA TGGATTCTCC TCTGCCAGTT TCGACGAGTA A
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| Protein sequence | MHTLTPDLAD LLAVAAAARQ RAYCPYSRFA VGAAALTASG VTFPGCNIEN AAYPSTICAE
RVALFNAYAA GEREIVALAV IADTPGPVSP CGGCRQVIFE LAPRAIVVMA NLRGAWRVAL
IGELLPDGFS SASFDE
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