Gene RoseRS_4392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4392 
Symbol 
ID5211376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5506957 
End bp5507823 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID640597971 
Productmethylenetetrahydrofolate dehydrogenase (NADP(+)) 
Protein accessionYP_001278675 
Protein GI148658470 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.553346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TCATACTTGA CGGGCGGGCG CTTGCAAAAA CACTCCGCGA GGAACTGCGC 
GCCGATACGC AGGCATTCAT TCAGAACAAC GGCATCGCTC CTTCGCTTGC CGTCGTCAAA
ATTGCAGGCG ATCCCGCCTC TGATCGCTAC ACACGCACCA TCCGCAAAGG ATGTGAGGAG
ATCGGCATAA CCTTCACCGA CCACACCCTG CCACCGGAAA CGACCCAGGC GATGCTCGAA
GAAACGATCA GCGCGCTGAG TTTCGACCGG ACGATCCACG GCATTCTGCT CCACCTGCCA
CTGCCGCCGG GATTGGATTC CGCCCGCGCT ATTGCGCAGA TCGACCCGGC TAAGGATGTC
GATGGCGTGC ATCCGTACAA CGCAGGACTC CTCGCCATGG GGCGACCGGG ACTGATCCCC
AACACTCCGG CTGGCGGTAT GGAACTGCTG CTGCGCAATA ACATTCCCCT CAAAGGGCAG
CACGCAACGG TTGTCGGGCG CAGCGTCGTT GTGGGGAAAC CCATGGCGCT GCTGCTGCTG
AACGAGCATG CCACCGTCAC CATTGCCCAT TCGCGCACAA AAGACCTGGC AGCAGTCGTG
CGCAGCGCCG ACATTGTTGT TGCTGCCACC GGCAAACCCG GCCTGATCAC CGGCGATATG
GTCAAACCCG GCGCTGTCGT CGTCGATTTT GGCGTCAATG TGCTCGAAGA CGGGCGTGTG
GTTGGCGACG TAGATTTTGA CAGTGTCGTC AACGTTGCTT CTGCGATTAC CCCGGTTCCC
GGCGGTACAG GACCGGTGAC CAATGTCATG CTGTTGCGCA ATGTTCTGCG CGCAGCGCAA
CAGCAGCTGG CGTCCCGCCA TCATTGA
 
Protein sequence
MTAIILDGRA LAKTLREELR ADTQAFIQNN GIAPSLAVVK IAGDPASDRY TRTIRKGCEE 
IGITFTDHTL PPETTQAMLE ETISALSFDR TIHGILLHLP LPPGLDSARA IAQIDPAKDV
DGVHPYNAGL LAMGRPGLIP NTPAGGMELL LRNNIPLKGQ HATVVGRSVV VGKPMALLLL
NEHATVTIAH SRTKDLAAVV RSADIVVAAT GKPGLITGDM VKPGAVVVDF GVNVLEDGRV
VGDVDFDSVV NVASAITPVP GGTGPVTNVM LLRNVLRAAQ QQLASRHH