| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4391 |
|---|
| Symbol | |
|---|
| ID | 5211375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5505285 |
|---|
| End bp | 5506769 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640597970 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_001278674 |
|---|
| Protein GI | 148658469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.6355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA ATATGCGATT AAGAACGTGC TTTTCTTCCT TCCCGGTCGG CGAACGCGAC
CGTCTTGCCG CTCTGATCGG ACGCAGCCCG CTGATGGCGT CGCTGGCTGC GATCCTGGTC
GGTCTTGCCG GTGGCGCAGT GGCGGCATTC GCGCCGTTCT GGCTTGGATT CGCAGCCCTG
GCAGCTCTGG CAGGGGTCTA CGCCATTCTG GTCGATACCC GTGTCGGGCT TGCGACCGTC
ATCGGGATCG CAACGATCGT GCCCTTCGCA ACGCTGCCGT TCCGGGCAGT GATCACGCCA
ACCCTGCTGA CCCTGGCGCT TGCGGCGTTG ATGGGGGTCT GGATCATGCG GATGCTGGTG
CGCGGTGATG AGCGGGTGAC GATCACACCG ATGGGCATGG CGCTGATCGG CTTTCTGGGC
ATCACCCTGT TTGCTTTCTT GCTTGGCTCA AATGCCAGTC CGGAACCATC GCTGTTGCAC
AACTACGTCA AATTCACAAT GGCGACCCTG TTCTTCTTCA GCGTCGTCAA CTGCGTGCGC
GACCGACAAA CGGTGCGCTG GGTCTTCCGT TTTCTCATCA TCGGTGCAGC AATCTCGGCA
GTGATCGCGC TGGTGTTGTA TGTTATTCCC GACCAGATGG CGCTTCAGAT TCTGGTGTCG
TTTGGGCGGA TCGGCTACCC CACCGAGGGG CGCGTTCTGC GCTATGTTGA AGACGACCCG
AATGGATTGA TGCGCGCGAT CGGTCTGTCG GTCGATCCCA ACAGTTTTGG TGGCATGCTG
GCGCTGATCG GGGCGCTGGC GGCGACGCAA CTGGTCAGTG AACGTCCGAC GCTGCCGCGA
CGCATGCTGC TCGTTGCTAC GGGCGTCATT CTGCTGGCGC TGTTCCTGAC GTATTCGCGC
GCGGCGCTGG GTGGTATGAT CGTCGCTGCC ATGTATGTGG CGACGCTGCG TTACCGACAG
CTCTGGTGGG TCATTCTGGC GACCGGCGCC CTGGCTGCCG TTCTATTCAT CGGGCTTGGG
GTCGGTGAGC GTTTCGTCGA GCGGATCGTC GAAGGGGTGC AGTTCCGCGA CCGGGCGAAC
CAGATGCGCC TGGCGGAATA CCAGAATGCC ATCGCCATTA TTCAGGCATA TCCGGTGTTC
GGCATTGGCT TTGGTCAGGC GCCGGAGATC GACCTGGTTG CAGGAGTGTC GAGCATCTAT
CTGGCGATTG CTCAACGCAC CGGTCTCGTC GGTCTGACCG CATTTCTGGG GATTATGATC
TGGTTTTTCG TGCGAAACTG GCGCGCTTTG CGTGCTGCCA GCGTGATTGG CGACGAAGAA
CGGGTCGCAT GGCTGGTGTC GTTGCAGGCG GCGCTGGCTG CTGCGCTGGC GGTGGGGCTG
CTCGATCACT ACTTCTTCAA CATCGAGTTC AGCCATATGA GCGCATTGCT CTGGGGAACG
ATCGGGCTGG CGGTGGCGAT TGAGGAGATG GGGGTGGAAG GTTGA
|
|---|
| Protein sequence | MTRNMRLRTC FSSFPVGERD RLAALIGRSP LMASLAAILV GLAGGAVAAF APFWLGFAAL
AALAGVYAIL VDTRVGLATV IGIATIVPFA TLPFRAVITP TLLTLALAAL MGVWIMRMLV
RGDERVTITP MGMALIGFLG ITLFAFLLGS NASPEPSLLH NYVKFTMATL FFFSVVNCVR
DRQTVRWVFR FLIIGAAISA VIALVLYVIP DQMALQILVS FGRIGYPTEG RVLRYVEDDP
NGLMRAIGLS VDPNSFGGML ALIGALAATQ LVSERPTLPR RMLLVATGVI LLALFLTYSR
AALGGMIVAA MYVATLRYRQ LWWVILATGA LAAVLFIGLG VGERFVERIV EGVQFRDRAN
QMRLAEYQNA IAIIQAYPVF GIGFGQAPEI DLVAGVSSIY LAIAQRTGLV GLTAFLGIMI
WFFVRNWRAL RAASVIGDEE RVAWLVSLQA ALAAALAVGL LDHYFFNIEF SHMSALLWGT
IGLAVAIEEM GVEG
|
|---|
| |