Gene RoseRS_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4387 
Symbol 
ID5211371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5500208 
End bp5500786 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID640597966 
Producthypothetical protein 
Protein accessionYP_001278670 
Protein GI148658465 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAAG CTGAAAGCCG CGTGACGCGC AACCAGGAGA TTGTAATCAC TCCGCAAAAG 
CGCTCCTGGA TACGCCCGAT GCTGGTCGCC GCCATTGCCG TTGCCCTGAA CATCATCGCA
TACCTGATAA TACCGCCAGA CCTTGCGTAT CGTCTCGGGT CGCTGGGATA TATCGGGGTG
TTTCTGATCA CCCTTATTTC CAACGCAACA ATTGTTGTGC CCATTCCCTA CTTCGGGCTG
GTAGCAGCGC TTTCACCCGG ACTGAGCATG GTCGGGGTAG GCATTGCCGG CGCGCTTGGT
TCGGTGATTG GCGAGTCGGT CGGTTTCTTT GTGGGGCGGT CGGGGCGCGG GGTCGTTGAA
CAGACACGGT TCTACCGTTG GGTGCAGCGC CAGCTCGAAC ATCCCTGGCG CGCGTTTGTG
GTGTTGTTTG CACTCTCGGC GCCGCCCAAT CCGGCGTTCG ATGTTGCCGG TCTTACGGCG
GGTGCGATGG GGTTGCCGTA CTGGATCTTC CTCAGCGCTG TCTTTCTGGC GCGGCTCGTG
CGTTTTGGCA TCGTGGCCTT CTTTGGCGGC GCAACGTAA
 
Protein sequence
MSEAESRVTR NQEIVITPQK RSWIRPMLVA AIAVALNIIA YLIIPPDLAY RLGSLGYIGV 
FLITLISNAT IVVPIPYFGL VAALSPGLSM VGVGIAGALG SVIGESVGFF VGRSGRGVVE
QTRFYRWVQR QLEHPWRAFV VLFALSAPPN PAFDVAGLTA GAMGLPYWIF LSAVFLARLV
RFGIVAFFGG AT