Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4387 |
Symbol | |
ID | 5211371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5500208 |
End bp | 5500786 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597966 |
Product | hypothetical protein |
Protein accession | YP_001278670 |
Protein GI | 148658465 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAGAAG CTGAAAGCCG CGTGACGCGC AACCAGGAGA TTGTAATCAC TCCGCAAAAG CGCTCCTGGA TACGCCCGAT GCTGGTCGCC GCCATTGCCG TTGCCCTGAA CATCATCGCA TACCTGATAA TACCGCCAGA CCTTGCGTAT CGTCTCGGGT CGCTGGGATA TATCGGGGTG TTTCTGATCA CCCTTATTTC CAACGCAACA ATTGTTGTGC CCATTCCCTA CTTCGGGCTG GTAGCAGCGC TTTCACCCGG ACTGAGCATG GTCGGGGTAG GCATTGCCGG CGCGCTTGGT TCGGTGATTG GCGAGTCGGT CGGTTTCTTT GTGGGGCGGT CGGGGCGCGG GGTCGTTGAA CAGACACGGT TCTACCGTTG GGTGCAGCGC CAGCTCGAAC ATCCCTGGCG CGCGTTTGTG GTGTTGTTTG CACTCTCGGC GCCGCCCAAT CCGGCGTTCG ATGTTGCCGG TCTTACGGCG GGTGCGATGG GGTTGCCGTA CTGGATCTTC CTCAGCGCTG TCTTTCTGGC GCGGCTCGTG CGTTTTGGCA TCGTGGCCTT CTTTGGCGGC GCAACGTAA
|
Protein sequence | MSEAESRVTR NQEIVITPQK RSWIRPMLVA AIAVALNIIA YLIIPPDLAY RLGSLGYIGV FLITLISNAT IVVPIPYFGL VAALSPGLSM VGVGIAGALG SVIGESVGFF VGRSGRGVVE QTRFYRWVQR QLEHPWRAFV VLFALSAPPN PAFDVAGLTA GAMGLPYWIF LSAVFLARLV RFGIVAFFGG AT
|
| |