| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4361 |
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| Symbol | |
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| ID | 5211345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5479417 |
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| End bp | 5481339 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597942 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001278646 |
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| Protein GI | 148658441 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.193811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATA ATCGCTGGCT GAAAAATAGT TTCGTCTACC TCATCATTCT TGTTGCTGCG
TTGGCGCTGT TCATCAATTA CTTCAACAAT GCGCAGGGTC AGCAAGAGGA ACGCGGCATC
TATCAGGTGC TCGCCGATGC AAAAGCTGGC AGAGTTGAGA AGATCGAAGC GCAGTCGGGC
AACTCCGAAA TCCTGGTGAC GTACCGCGAT ACCAGGGCTA AGGTGCGGTC ACGCATCGAG
TCGAACGATA GTATTACGAT GCTGCTTGTG CAGGCAGGCG TGCCGCTCGA CGCAGTGAAC
GTCGAGGTGC GCGCAGCGCC AGCATGGGGC GGTCTGCTGA ATGTCTTCAC GTTCCTGCTG
CCAGTCTTAC TGATGATCGG CTTCTTCATC TTCTTTATGC GTCAGGCGCA GGGGTCGAAC
AATCAGGCGC TCTCGTTCGG CAAGAGCCGG GCGCGGATGT TTTCCGGCGA TAAGCCGACG
GTAACATTTG CCGATGTTGC CGGTCAGGAA GAAGCCAAGC AGGATTTGAC AGAAGTCGTT
GAGTTTCTCA AGTTTCCCGA CAAGTTTGCC GCCCTTGGAG CGCGTATTCC GCGTGGTGTG
CTGATGGTAG GTCCGCCAGG AACCGGCAAG ACCCTCCTGT CACGCGCGGT TGCCGGTGAA
GCCGGGGTGC CGTTCTTCTC GATCTCCGGT TCAGAATTCG TCGAGATGTT CGTCGGCGTC
GGCGCCAGCC GTGTGCGCGA CCTGTTCGAC CAGGCGAAGC GTAATGCCCC CTGCATCGTC
TTCATTGACG AGATCGATGC CGTCGGGCGT CAGCGCGGCG CCGGGCTTGG CGGCTCCCAC
GATGAGCGTG AGCAGACCCT CAACCAGATT CTGGTCGAGA TGGACGGCTT TGATACGAAT
ACGAATGTCA TCGTGATTGC AGCCACGAAC CGCCCCGATG TGCTCGACCC GGCACTGGTG
CGCCCCGGTC GCTTCGACCG CCAGGTGGTG CTCGATGCTC CGGACGTGAA AGGGCGCATC
GAGGTGCTCA AGGTGCATAC CAAGGGCAAG CCGCTCGCCG ATGATGTGCA GTTCGATGTG
ATCGCGCGTC AGACCCCCGG TTTCTCCGGT GCGGACCTGG CGAATGCAGT GAACGAGGCG
GCAATCCTGG CGGCGCGCCG CTCGAAGAAG AAGATCGGCA TGGCAGAGTT GCAGGACGCG
ATTGAGCGCG TGGCGCTCGG TGGTCCGGAG CGCCGCAGTC GGGTGCTGAC CGAACGTGAG
AAATTGCTGA CTGCATACCA CGAATCGGGG CACGCCATCG CCGCCGCTGG TATGCCCAAA
GCTTTCCCGG TGCAGAAAGT GACGATCGTG CCGCGTGGAC GCGCTGGCGG GTATACGCTC
TATCTGCCGG AAGAAGATAG CATTCGCTAC ACTACCGCAT CGCAGTTCGC CGCACAACTC
GTGTCGGCGC TCGGCGGGCG CGTGGCGGAA GAGATCGTCT TCGGTCCTGA TGAGGTCTCG
ACCGGCGCCG CAGGTGACAT TCAGCAGGTG ACGCGCATTG CCCGCGCAAT GGTGACGCGC
TACGGTATGA GTCCGAAGCT CGGTCCGATT GCGTTCGGTG AGCGTGAGGA ACTGATCTTC
CTCGGGCGAG AGATCACCGA GCAACGCAAC TACAGCGACG ATGTCGCGCG CGAGATCGAT
AATGAAGTGC ATCGCATCGT TTCGGAAGCG TATGAGCGCA CACGCCTGAT CCTGACGCAT
AACCGCGAGG TGCTGAACGA TATGGCGAGT GCGCTGATCG AGTATGAAAC GCTCGATGGC
GAACGCCTGA GAGAATTGCT CAGCCGTGTG GTGAAGATCG ATGAGATCGA GAGTCGGGTG
AACGGCGGCA ACGGCATGCT GACCACGCCA TCGGGCATGA ACGTTCCGTC TGCACAGGCA
TAA
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| Protein sequence | MGDNRWLKNS FVYLIILVAA LALFINYFNN AQGQQEERGI YQVLADAKAG RVEKIEAQSG
NSEILVTYRD TRAKVRSRIE SNDSITMLLV QAGVPLDAVN VEVRAAPAWG GLLNVFTFLL
PVLLMIGFFI FFMRQAQGSN NQALSFGKSR ARMFSGDKPT VTFADVAGQE EAKQDLTEVV
EFLKFPDKFA ALGARIPRGV LMVGPPGTGK TLLSRAVAGE AGVPFFSISG SEFVEMFVGV
GASRVRDLFD QAKRNAPCIV FIDEIDAVGR QRGAGLGGSH DEREQTLNQI LVEMDGFDTN
TNVIVIAATN RPDVLDPALV RPGRFDRQVV LDAPDVKGRI EVLKVHTKGK PLADDVQFDV
IARQTPGFSG ADLANAVNEA AILAARRSKK KIGMAELQDA IERVALGGPE RRSRVLTERE
KLLTAYHESG HAIAAAGMPK AFPVQKVTIV PRGRAGGYTL YLPEEDSIRY TTASQFAAQL
VSALGGRVAE EIVFGPDEVS TGAAGDIQQV TRIARAMVTR YGMSPKLGPI AFGEREELIF
LGREITEQRN YSDDVAREID NEVHRIVSEA YERTRLILTH NREVLNDMAS ALIEYETLDG
ERLRELLSRV VKIDEIESRV NGGNGMLTTP SGMNVPSAQA
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