Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4360 |
Symbol | |
ID | 5211344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5478404 |
End bp | 5479114 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597941 |
Product | hypothetical protein |
Protein accession | YP_001278645 |
Protein GI | 148658440 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.267363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTGC ACGCTGATGA CGTATTCGCG CCGCTCGACG ATGACCACGT CCTGCAACGG CTGGCAGGCG GCAACGAGAC GGAGGTGTAC AAAACCGATG ACCATCGCCA CGTCGTGAAA GTCAAACACG ACCTGGGGGG CGCCCGTGAC GCGGCGATCC GCCAGGCGCG GTGGATGCGC GATACCGCCG AACGCTACAC CGCATGCCTG GGAGAACGCT ATACTATCCC CAACTATTTC ATTGTGGCGC GCGGCAGCGA CGGGCAGGCG CATCCGTTGA CGATCCAGCC ACTCCTGTCT GATGCATGCC CCCTCGATGC TGTTGACTAT CGCGCACTGC TCCCGGCACA ACGCGCCCTG ATTGCCGCAC AACTCAGCGA GATCCTCCGC AGAGCGCACG CTTTCTACCG GGCAACCGGC AGTATGCCCG ACCTGTATGG GCAATCCGCC AGAAGCAGCG ATGAACGCAA ATCCAGGAAG TCAATCCCTC ACCTGCCGCA ACGCCTCTGG AGTTTCCTGG TTGAACGCAC ACTGCTGCGA TCGCACAACC TGGTGCTGAT CCGCGATCCA GAGTATCGAA TCGTCCTGAT CGACTACGAT CCGGTGCGCC GGGGGCGACT GTACCGATTG ACATATTTTG CCGTGCGTCG CCTGTTACTG TTGCGTGATC TTGCCGTTCT GGCATGGCTG CGCCTGGGAT GGTTGACCTG A
|
Protein sequence | MTLHADDVFA PLDDDHVLQR LAGGNETEVY KTDDHRHVVK VKHDLGGARD AAIRQARWMR DTAERYTACL GERYTIPNYF IVARGSDGQA HPLTIQPLLS DACPLDAVDY RALLPAQRAL IAAQLSEILR RAHAFYRATG SMPDLYGQSA RSSDERKSRK SIPHLPQRLW SFLVERTLLR SHNLVLIRDP EYRIVLIDYD PVRRGRLYRL TYFAVRRLLL LRDLAVLAWL RLGWLT
|
| |