Gene RoseRS_4336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4336 
Symbol 
ID5211320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5451771 
End bp5452454 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID640597920 
Producthypothetical protein 
Protein accessionYP_001278624 
Protein GI148658419 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.145774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00399105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATA CTGTAGCCCT TCCAACGATA ACGCTCCGAT CTCTGGATGC AGGTTGGAAC 
TATGAGCGTT GGGAGCGCGA ACTTCCTGAT GACGGCAATC GCTACGAGGT GATCGAGGGC
ATTCTGTACA TGACTACTGC ACCGGGTTAT TTCCACCAGT GGATCGTGCG TCGTCTGGAT
CAATACGTCG GCGTGCCGCT GGAACAACAA GGGCTGGCAT ATGCCGCCAC TGCGCCGATT
GGCGTGCTGA TGCCCGGTTG TGAGCCGGTA CAGCCGGATT TTGCGCTGGT ACGCCGTGAT
CGCGCGGGCA TCATCAGCGA ACGCCGTATC CGCGGCGCCC CCGATCTGAT CGCGGAAGTG
CTGTCACCAT CAAATCCTGA GCAGGACACG GTGATCAAAA GGCGCGTCTA CGCCCGTGCA
GGCGTGCCCG AGTACTGGAT CATTCGCCCT GAAACGCGCG ATGTGCTGGT GTGTCGCAAC
CCCGACGCCA CGCTCGGCGA TTATACATTC ACGCTGCTGG TCGGCGCTGC CGAAACCCTG
TTGGCGCACC CGTTTCCGAT CAGGATGTCG GTATCGATGA TGATCAGCCC GCTCACGCTC
TACGACCCCA TTCGCGCTGA CGCAGACTGC GTAGCCACGC AGTGCTATCC TGCATGTCCT
CACGGTCTCG CCACATCCCG ATGA
 
Protein sequence
MADTVALPTI TLRSLDAGWN YERWERELPD DGNRYEVIEG ILYMTTAPGY FHQWIVRRLD 
QYVGVPLEQQ GLAYAATAPI GVLMPGCEPV QPDFALVRRD RAGIISERRI RGAPDLIAEV
LSPSNPEQDT VIKRRVYARA GVPEYWIIRP ETRDVLVCRN PDATLGDYTF TLLVGAAETL
LAHPFPIRMS VSMMISPLTL YDPIRADADC VATQCYPACP HGLATSR