| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4322 |
|---|
| Symbol | |
|---|
| ID | 5211306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5423733 |
|---|
| End bp | 5424203 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640597906 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_001278610 |
|---|
| Protein GI | 148658405 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.495347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCG ATGAAGCCCG TTTTCGTCAA TTGATGGGTC ATTTTGCCAG TGGCGTCACC
GTGGTGACGA CTGAGTACGA GGGGCAGTTG TTCGGTCTGA CGGTCAGTTC CTTCTGCTCA
TTGTCGCTCC GCCCGCCGCT GGTGCTGATC TGTATCGATA AGCAGGTTCG CGCCCACGAC
GCGATTGCCG CCGCCGGGCG TTATGCCGTC AATATTCTTG AGAAGCACCA GGAGTATCTC
TCGCGCCGCT TCGCCACGCC GGAGATCGAC AAATTCATGG GGATCGCCTG GCGTTTCGGG
CAGTTGGGGT TGCCAATCCT GGAAGATACG CTGGCGGCGT TCGAGTGCCG GTTGACCGAT
ACGTTGCCGG GCGGAGATCA TTCCATCTTT GTCGGCGAAG TGCAGAACGC GGAGATCCGT
GAAGGTTCAC CGTTGATCTA CTATCGTCGC GGCTATCACG AGTTGAAGTG A
|
|---|
| Protein sequence | MPVDEARFRQ LMGHFASGVT VVTTEYEGQL FGLTVSSFCS LSLRPPLVLI CIDKQVRAHD
AIAAAGRYAV NILEKHQEYL SRRFATPEID KFMGIAWRFG QLGLPILEDT LAAFECRLTD
TLPGGDHSIF VGEVQNAEIR EGSPLIYYRR GYHELK
|
|---|
| |