| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4290 |
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| Symbol | |
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| ID | 5211274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5377733 |
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| End bp | 5379553 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597877 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001278581 |
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| Protein GI | 148658376 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.286091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00534263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCGGA ACAGTCTCAG AGCGCGCACC AGAGGTAAAC CGTACATTGG TCGTCTGGTG
CGCGCGAATG TGTATGATCT CTGGTTGCTG CTCAACGAGT CCTGGCTGGT CCTGATTGCA
TTCGTCCTGC TTGCCGCACT GACATCGAGT TACCTGGCAT TCCTCTATCC CGAAACCGCC
GAATCATCGC GTCCGCAAGG ATTGCCGGAA GCGCTCTATG AAACGCTGAC CTTGATGACT
CTGCAGAGCG ATCTGGCGTT TCCGCGCGGT GATCTGCTCG GCGAACTGAT CTTCTTTCTG
ACGCCGCTCC TCGGTCTGGC GCTGATCTTT CAGAGTGTGT TGAACTTCGG GCGCCTGTTG
CTCGACAAGG GAAGTCGTCG TGAAGCCTGG CAGGTGGCGC TGGCTTCGAC CTACCGCAAT
CATGTGATTG TCTGTGGGCT TGGGCGCGTC GGGCTGCGCA TTGTCACGCA GTTGCACGCT
GCCGGGTACG AGGCAGTTGT GATCGAGCGC GACTGGAACA GCGAGTTTGT GCAGCGCGTG
CTCAACCTGG GCGTCCCGAT TGTGCTGGGC GATGCCCGCG AACCAACGGT GCTGCGCCAG
GCAGGTATCA GATATGCGCG CGCGGTCGTT GCGACGATTA ATGATGACTT GCTGAATGTG
GAAATTGCCC TGGGGGCACG CGCTGTTCAG CCGGGCATTC GGGTGGTGCT GCGCGTGTTC
AACGAGGAAC TGGATCGCAA TCTGGAACGC ACGCTCGGAC CGAACAGTGC GTTTAGCGTC
TCACTGGTTG CCGCCCTTAC CTGTGCCGCT GCCGCAGTCA GCCGCGATAT TGATTATGCG
CTGACTACTG GCAGTTATCA ATTGGGGGTT GCGCAGATTG TGGTTCAACA GGACAGTGAG
ATTGCCGGCT TCATCCGCGC CGTCGAGTCA GCATATCACG TCCGTATCGT GTATCAGGTC
AGTCAGGAAG GTCGACCCAA GCTGTACAGC TCGCTCAACC GGTTGAGCGC TGGCGACCGG
ATAACGGTCA TCGGAACCCT CGAACGGATC GAGGAGATGC GGCAGCGCAA TGTGGCATTC
AGCAAAGCAG CGTTTCTCAC GCCAGGAAAA CTGGTGCGCC CCACCGAACA GTACAATACG
GTTATCGTTT GCGGATTAGG GAAGGTCGGG TTTCGGGTGG TCAACCAGTT GCACAAACTG
AACCCGCGCC CACGGATCGT TGTTGTGCGC CTGGGGAATG ATCGCCCGGA ATTCGTCCAG
CAGATCGGTC AACTCGAAGG GGTCGCCGAC GTGATCGGCG ATGCGCGCAA CGTCGAGGTT
TTATGCCGCG CCGGTCTCAA TGAAGCCTAT TCCGTCGCGG CAATGACTTC CGATGACCTG
CAGAATGTGC AAATTGCACT CGCAGCCCGG CGTTATCGCC CCGATATCCA CATCGTTCTG
CGCACCTTCA GCGACGTGCT GGCAGAACGT CTGGTTGAGA TTTTTGGCAT TCATACGACC
TACAGCACCT CGGCGCTGGC GGCGCCGACA ATGGCAGCGG CGGCGCTTGT GGGGAATGTC
CGCCAGGCGT TCTTTATCGA CGGGCGCCTG GTAGCCACCG ATGAAATCCG GTTGTGCGAT
GGACACCCCC TGATCGGCGT GCGCATCGAC GATCTGCGCG AACGGGAATC GGCGCTTGTG
ATCGACGTGC AACGTAACGG TGAGAACCTT CTGCTGCCCG ACCTCGATCT GTGTCTGGCT
TCCGGCGATC ACGTCACCCT TCTGGCGCCG ATCGAGAGTA TTCAACGGAT ACGGAACCGG
GGGATGAGGA CTGGGAATTG A
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| Protein sequence | MIRNSLRART RGKPYIGRLV RANVYDLWLL LNESWLVLIA FVLLAALTSS YLAFLYPETA
ESSRPQGLPE ALYETLTLMT LQSDLAFPRG DLLGELIFFL TPLLGLALIF QSVLNFGRLL
LDKGSRREAW QVALASTYRN HVIVCGLGRV GLRIVTQLHA AGYEAVVIER DWNSEFVQRV
LNLGVPIVLG DAREPTVLRQ AGIRYARAVV ATINDDLLNV EIALGARAVQ PGIRVVLRVF
NEELDRNLER TLGPNSAFSV SLVAALTCAA AAVSRDIDYA LTTGSYQLGV AQIVVQQDSE
IAGFIRAVES AYHVRIVYQV SQEGRPKLYS SLNRLSAGDR ITVIGTLERI EEMRQRNVAF
SKAAFLTPGK LVRPTEQYNT VIVCGLGKVG FRVVNQLHKL NPRPRIVVVR LGNDRPEFVQ
QIGQLEGVAD VIGDARNVEV LCRAGLNEAY SVAAMTSDDL QNVQIALAAR RYRPDIHIVL
RTFSDVLAER LVEIFGIHTT YSTSALAAPT MAAAALVGNV RQAFFIDGRL VATDEIRLCD
GHPLIGVRID DLRERESALV IDVQRNGENL LLPDLDLCLA SGDHVTLLAP IESIQRIRNR
GMRTGN
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