| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4285 |
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| Symbol | |
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| ID | 5211269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5372011 |
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| End bp | 5373141 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640597872 |
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| Product | GHMP kinase C terminal domain-containing protein |
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| Protein accession | YP_001278576 |
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| Protein GI | 148658371 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
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| TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0398897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0848141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG CCGATGCCGA ACTCCGTGCA GCGCTGCGCG CTCATGGGCT GAGGTGGGAA
GCCTACCCGG ATCTGACAGG GGCTGCGCGC GTGCGTGGCG TGGCAGCCGC GCTCGCCTAC
CCGATGCAGG GGGTCTTGAA ATACCACGGA CTGAGCGACT GGAAGTATCG CATCGCCTTC
CTGCCGAGCA TCTCGCTCTG CAACGACGCA GGGCATACCC TGACGCTGGT TGAGTTCGAT
CCCGATCTGC CGGACGACAG CGCAACCATC AATGGTCAAC CGGCGCGTGG GCGTGAACTC
GAACGGGTGC AGCAGAGTCT CGACGCGATC CGCGCCGTAT CCGGCGCGAC CGTGCACGCC
CGTGTGACGT CACGCAATGT CACCCGCGGA ACACGCTTCG GAAAAGGGCT TGGGTCGAGC
GCGTCGGCGT CAGCGGCGCT GGCGCTGGCA GCAATCGCCG CCCTGTACGG CGAGGAGGCG
GCATCCAACC GTCGCCTGGT CAGTTGCATG GCGCGACTGC TGGCGGGTTC CGGCTGTCGC
AGTGCAGCTG GCGGATGTTC CATCTGGCTG TCGTACCCTG GCATCGCGCA CGAAGAGAGT
TTTGCCGTGC GCCTCGATGA TGCCGGGCAA CTCGATGATG TGCGCCTGAT CACTGTACCG
ATCGATTCGC GCATCGGACT GAAGACCGAA CAGGCGCATA TGGACGCGCC TGCGAGCGCG
CTGTTCCGCT GCTGGATGCT CAACCGTCGT GACGAGGCGC TGGCGTGCAT CGCGGCGGCG
CGTGCAGGCG ACTGGCGCAC CCTTGGGCAA TGGGCGGAAC TGGACAGCAT GCGACTGCAC
GGCATCACCA TGTCGGGGAG TCTGGAGAAC AAACTGATTG GCTGGGAACC GGAGAATATT
GCACTGTTTC GCATGTGCAA CGATCTGCGC AGCGGTGGCG TCCCCGTCTA CTGCTCGACC
GACACCGGTC CGACAGCGGT GTTCATCACT CACCGCGACT ATGAGGAGGC GGTCGTCGCA
GCCATCGAGG CGACCGGTCT TGGACTGGAA ACGATCCGTG GACGGATCGC CGGTCCGGCG
CGCCTGGTCG ATGTCGCCTG GGCGCAGGGA GCGTTGGGGG TTGAAGGGTG A
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| Protein sequence | MASADAELRA ALRAHGLRWE AYPDLTGAAR VRGVAAALAY PMQGVLKYHG LSDWKYRIAF
LPSISLCNDA GHTLTLVEFD PDLPDDSATI NGQPARGREL ERVQQSLDAI RAVSGATVHA
RVTSRNVTRG TRFGKGLGSS ASASAALALA AIAALYGEEA ASNRRLVSCM ARLLAGSGCR
SAAGGCSIWL SYPGIAHEES FAVRLDDAGQ LDDVRLITVP IDSRIGLKTE QAHMDAPASA
LFRCWMLNRR DEALACIAAA RAGDWRTLGQ WAELDSMRLH GITMSGSLEN KLIGWEPENI
ALFRMCNDLR SGGVPVYCST DTGPTAVFIT HRDYEEAVVA AIEATGLGLE TIRGRIAGPA
RLVDVAWAQG ALGVEG
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