Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4276 |
Symbol | |
ID | 5211260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5362233 |
End bp | 5363162 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640597863 |
Product | histidine kinase |
Protein accession | YP_001278567 |
Protein GI | 148658362 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.574796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.165932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACT TCATCCTGGA ACACTCACAG CCTATTTCGC TTCCCCTTGA TCGCGTGCGT CCGTCGGCGA CGCGCCTTTC TCCCGAACAG CAGCGTCTGG AACGTGAGCG GTTGTTGGCA CTGCTCGCCG AGCGTGAGGA AGAGATTCGT CTCCTGCGCA GCATGCTTGC TGAGGCGCGG CGCGCCGGGC AGCGCCAGAT CGCCCGTGAA CTGCACGATG GTGTGGCGCA GCACATTACT GCTGCATACC TGCATCTCCA ATCCCTGAGC GACATCTACC GTCCGCGTTC GCCGGAGTCG CGCGAAGCGT TCGCGCGCGC CATTGAGTTG ACCCGCCGCG CCGCCGATGA GGTTCGTCGG GTCATTACCG GATCGCCGCC AGCGCCGCTC GATGGGCGCT GCCTGGCAGA GGCTATCCGT GGCGAAGCGA CGGCGTTGAG CCGTGACGGG TGGCAGGTGA CGCTGCACAT GTCCGACATC GGTTTCGTGC CGACGGATAT CGAACTGGCG CTCTTTCGGA TGACGCAGGA GGCGTTGCAG AACGTGCGCC GCCACGCGGG ACGTTGTCGC GTGCGGCTCA CCCTGGAGCG CGACGGCGCA CAGGTGCGCC TCATGATCGC CGACAATGGG TGTGGTTTCG ACCCGCAGCA GACTCCGGCG GCGCGCTTCG GTCTGGCAGG GATGCGGGAG CGCGTGGCGC TGCTGGGAGG CACGATCAAT ATCCAGAGTC GTCCCGGCGC CGGCACAACG ATTGTCATAA CGATACCGCT GGACGTTCAA CTGCCGGATT CGGGTGACGC GACATCTCTG AAAATCGCGC TGCGGGAAAA CGGCAAGTCG CGCACGCCAA TCGACAGGAT CAGCGCCGGA GCGCCCACCC CGAACATGGC GCGCTGCCAG AACAGCAGAG ATAGAGGAGG AGCGTCGTGA
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Protein sequence | MTHFILEHSQ PISLPLDRVR PSATRLSPEQ QRLERERLLA LLAEREEEIR LLRSMLAEAR RAGQRQIARE LHDGVAQHIT AAYLHLQSLS DIYRPRSPES REAFARAIEL TRRAADEVRR VITGSPPAPL DGRCLAEAIR GEATALSRDG WQVTLHMSDI GFVPTDIELA LFRMTQEALQ NVRRHAGRCR VRLTLERDGA QVRLMIADNG CGFDPQQTPA ARFGLAGMRE RVALLGGTIN IQSRPGAGTT IVITIPLDVQ LPDSGDATSL KIALRENGKS RTPIDRISAG APTPNMARCQ NSRDRGGAS
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