Gene RoseRS_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4276 
Symbol 
ID5211260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5362233 
End bp5363162 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID640597863 
Producthistidine kinase 
Protein accessionYP_001278567 
Protein GI148658362 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.574796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.165932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACT TCATCCTGGA ACACTCACAG CCTATTTCGC TTCCCCTTGA TCGCGTGCGT 
CCGTCGGCGA CGCGCCTTTC TCCCGAACAG CAGCGTCTGG AACGTGAGCG GTTGTTGGCA
CTGCTCGCCG AGCGTGAGGA AGAGATTCGT CTCCTGCGCA GCATGCTTGC TGAGGCGCGG
CGCGCCGGGC AGCGCCAGAT CGCCCGTGAA CTGCACGATG GTGTGGCGCA GCACATTACT
GCTGCATACC TGCATCTCCA ATCCCTGAGC GACATCTACC GTCCGCGTTC GCCGGAGTCG
CGCGAAGCGT TCGCGCGCGC CATTGAGTTG ACCCGCCGCG CCGCCGATGA GGTTCGTCGG
GTCATTACCG GATCGCCGCC AGCGCCGCTC GATGGGCGCT GCCTGGCAGA GGCTATCCGT
GGCGAAGCGA CGGCGTTGAG CCGTGACGGG TGGCAGGTGA CGCTGCACAT GTCCGACATC
GGTTTCGTGC CGACGGATAT CGAACTGGCG CTCTTTCGGA TGACGCAGGA GGCGTTGCAG
AACGTGCGCC GCCACGCGGG ACGTTGTCGC GTGCGGCTCA CCCTGGAGCG CGACGGCGCA
CAGGTGCGCC TCATGATCGC CGACAATGGG TGTGGTTTCG ACCCGCAGCA GACTCCGGCG
GCGCGCTTCG GTCTGGCAGG GATGCGGGAG CGCGTGGCGC TGCTGGGAGG CACGATCAAT
ATCCAGAGTC GTCCCGGCGC CGGCACAACG ATTGTCATAA CGATACCGCT GGACGTTCAA
CTGCCGGATT CGGGTGACGC GACATCTCTG AAAATCGCGC TGCGGGAAAA CGGCAAGTCG
CGCACGCCAA TCGACAGGAT CAGCGCCGGA GCGCCCACCC CGAACATGGC GCGCTGCCAG
AACAGCAGAG ATAGAGGAGG AGCGTCGTGA
 
Protein sequence
MTHFILEHSQ PISLPLDRVR PSATRLSPEQ QRLERERLLA LLAEREEEIR LLRSMLAEAR 
RAGQRQIARE LHDGVAQHIT AAYLHLQSLS DIYRPRSPES REAFARAIEL TRRAADEVRR
VITGSPPAPL DGRCLAEAIR GEATALSRDG WQVTLHMSDI GFVPTDIELA LFRMTQEALQ
NVRRHAGRCR VRLTLERDGA QVRLMIADNG CGFDPQQTPA ARFGLAGMRE RVALLGGTIN
IQSRPGAGTT IVITIPLDVQ LPDSGDATSL KIALRENGKS RTPIDRISAG APTPNMARCQ
NSRDRGGAS