Gene RoseRS_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4270 
Symbol 
ID5211255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5353908 
End bp5355725 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content62% 
IMG OID640597859 
Productnon-specific protein-tyrosine kinase 
Protein accessionYP_001278563 
Protein GI148658358 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.198419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC AACGTTACCT GACTCTCTTC TGGCGCTGGC TCTGGCTCAT GCTGTTGATG 
ACGCTGATCG CTGGCGGCGC AGCATACCTG GTCAGTCGCC AGATGACACC GATCTATGAA
GCTTCGACCA CCCTGCTGAT CAATCAGGCG CCGGCTGGCA GTTCGTCACC CGACTATCAG
GCAGTGCTGA CCGCAGAGCG TCTGGCGCGC ACCTACGCTG AATTGCTGGT GAAACGTCCG
GTGCTTGAAG ATGTTGTGCG CGAACTGAAC CTCTCGATTG CCCCATCGTT GCTTGCCGAG
CGTGTTCGCG TGCGCCCGAT CCGCGACACG CAACTGATCG TCGTGACCGT CGAAGACATT
GATCCGCAGC GGGCGGCTGA TATTGCCAAC CGGATCGTCG CCGTCTTCAG TGAGCAAAAC
CGTGAGTTGC AGTCCGAACG GTTCGCCGAG TCGAAACGCA GCCTGATGAA CGAGATCGCC
AAACTTCAGG CGGATATCGA TGCAACGCAG GCGGAAATCG CCGTCCTGCG CGGTATCGAC
GACCCAACGC GCCGGGCGCG CCTGGAGGAG GCGCTGGTGC AGTATCGCAG CAGTTATGCC
ACCGTGCTGC GTAGCCTGGA AGAGGTACGG CTTGCCGAAG CGCAGTTGAC CAACAGCGTC
AATGTGGTGG AAACCGCCGT TCCCGTGACT ACCCCCGTGC GCCCACGGAT CGTGACGAAC
ACTGCCATGG CGGCTGTCGC CGGTCTGTTG CTGGCGGTTG GATTGGCGCT GCTGATTGAA
TATCTCAGTG ATCGGGTCAG TTCCGCCGAA GACGTGACTG CCGCTACTCA CGTTGGCATG
CTGGCAGCCA TCGGGCGGAT TGACGGCGCG GAGCCGTCAG ACAAACTGGT GATGCTGAGG
GATCCGTTCT CGCAGGTCGC CGAGGCGTAC CAGATGTTGC GCGTCAAACT GGAGATCGCC
AGATTTGAGA AGCCGCTGCA TACGCTGCTC GTGACCAGCA GCAGTCCTGG GGAAGGGAAG
AGCACGACTG CGGCGAACCT GGCGCTGGCG ATTGCGCGCT CCGGTAAGCG CGTCATCCTG
GTGGATACCG ACCTGCGGCG TCCATCATTG CACCGCTTTT TCCGCCACGC CAATCTGCGC
GGCGTGACGA CGGCGCTGGT GCGCGATCCG TCGGATAGCC TCTACAACCA CATGATCGCC
ACCGGTCTGG AGAATCTGCT GGTGCTGCCG AGTGGTCCAG TTCCCTCCGA TCCGGCGGTG
ATGGTCAGTT CGAAGAAGAT GCTCGACCTG ATCGATGAAC TCAAACGCAT GGCGGATGTC
GTGGTGTTCG ACAGCCCTCC CATTCTTGCC GTGGCGGATG CGATACCGCT GGCGCATATC
TGCGATGCCA CGCTGCTGGT GGTGCTGGCT GGAGCCACGC GCACCAGTCA GTTGCGCCGC
GCCTGTGATC AGTTGCTTCA GGCGGGCGTC GAGCCGCAGG GGGTCGTCCT GAACCGGGTG
ACGAAAGAAC AGGGCGGGTA TGACCATTAC TACTACTACT ACGGACAGAA CCGGAAGCGC
AGTCGTCGCG GGGTGTTGAG CCGGCTGTTC AAACGGCGAC GACGTCGCAA TGCCGTTCCA
GGAGTTGTCG ATACATTGGA TACGGTCATG AGCGGCAGCG GGCAGACGCT CTATGGCGCA
CCGGACGTGG TGGAGGCAAC AGTTCACCGG CGCGCGCCGG ATATGACCAC GCACCCCGAC
GCACAACCGG CAGTGACCGC CACGACTGCG GTGCAGGGCC TGGACGAGCG GCGGAATGGC
AGGGCGCCTC ATCAGTGA
 
Protein sequence
MTLQRYLTLF WRWLWLMLLM TLIAGGAAYL VSRQMTPIYE ASTTLLINQA PAGSSSPDYQ 
AVLTAERLAR TYAELLVKRP VLEDVVRELN LSIAPSLLAE RVRVRPIRDT QLIVVTVEDI
DPQRAADIAN RIVAVFSEQN RELQSERFAE SKRSLMNEIA KLQADIDATQ AEIAVLRGID
DPTRRARLEE ALVQYRSSYA TVLRSLEEVR LAEAQLTNSV NVVETAVPVT TPVRPRIVTN
TAMAAVAGLL LAVGLALLIE YLSDRVSSAE DVTAATHVGM LAAIGRIDGA EPSDKLVMLR
DPFSQVAEAY QMLRVKLEIA RFEKPLHTLL VTSSSPGEGK STTAANLALA IARSGKRVIL
VDTDLRRPSL HRFFRHANLR GVTTALVRDP SDSLYNHMIA TGLENLLVLP SGPVPSDPAV
MVSSKKMLDL IDELKRMADV VVFDSPPILA VADAIPLAHI CDATLLVVLA GATRTSQLRR
ACDQLLQAGV EPQGVVLNRV TKEQGGYDHY YYYYGQNRKR SRRGVLSRLF KRRRRRNAVP
GVVDTLDTVM SGSGQTLYGA PDVVEATVHR RAPDMTTHPD AQPAVTATTA VQGLDERRNG
RAPHQ