Gene RoseRS_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4255 
Symbol 
ID5211240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5338322 
End bp5339260 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID640597844 
ProductABC transporter related 
Protein accessionYP_001278548 
Protein GI148658343 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGGCGATTGA CATACGTGAT GTGCGCGCGC ACTATGGCAA AGGGCAACGG 
CGCGTCGAGG CGCTGAAGGG CGTTTCTCTG GACGTGCAGC GCGGCGACAT CTTTGGTCTG
CTCGGACCCA ATGGCGCAGG CAAGACGACG CTGCTCTCGT GCATCGAGGG CTTGCATCGC
CCGGATACCG GCGCCATCGT CGTCGCTGGC ATCGATGTGC TGCGCGATCC GCAACGCGCC
CGGCGCAAAC TGGGCATTCA ACTCCAGAGC ACTGCGCTGA TCGACGGATT GACTGCGACC
GAACTCATCG AAGTCTACGC TGCGCTCTAC GAAGTCTACC CATCGCGCAG CAGGATACTG
GAACTGCTGG AACAGTTCGC CCTTGTTGAT CAGGCGCACC GGCGGGCGAA ACAGATGTCG
GGCGGGCAGC AGCAGCGTCT GGCGCTGGCA ATCGCACTGT CCACCAACCC GGAAATTGTG
TTGCTCGACG AACCGACTGG ATCGCTCGAT CCGGCTGCGC GCCGCGAAGT CTGGCGCATG
ATCCGCACAC TGAAGGATCA GGGGCGCACG ATTGTGATCA CAACGCACAG TATGGACGAA
GCGGAGTCGC TGTGCGGGCG CGTAGCGATC TTAGATGAGG GGCGCATCGT GGCGTGCGAC
TCGCCGCACC GCTTGATCGC CGCAGCCGAC GTGCGACCGG TGCTGAAAGC AACGGTTGAT
CTGCCGCTGG ACGCCCTTCC GCCATTGACT GGCGCACTGG AGATGCGCTA CGTCGGCGAA
CGACTCGAAA TCGAGACGGC AAATCCTGAA GCCACGCTGC AGGCGCTCTA CATGGCGGCG
CAACAGTACG GACGGTTGGT GCGCGATATT ACTGTGCGCC AGCCTAACCT GGAAGATGTG
TACCTCAAAT TGACAGGAAG GAGCCTGAGC CAGCTATGA
 
Protein sequence
MSELAIDIRD VRAHYGKGQR RVEALKGVSL DVQRGDIFGL LGPNGAGKTT LLSCIEGLHR 
PDTGAIVVAG IDVLRDPQRA RRKLGIQLQS TALIDGLTAT ELIEVYAALY EVYPSRSRIL
ELLEQFALVD QAHRRAKQMS GGQQQRLALA IALSTNPEIV LLDEPTGSLD PAARREVWRM
IRTLKDQGRT IVITTHSMDE AESLCGRVAI LDEGRIVACD SPHRLIAAAD VRPVLKATVD
LPLDALPPLT GALEMRYVGE RLEIETANPE ATLQALYMAA QQYGRLVRDI TVRQPNLEDV
YLKLTGRSLS QL