Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4255 |
Symbol | |
ID | 5211240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5338322 |
End bp | 5339260 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597844 |
Product | ABC transporter related |
Protein accession | YP_001278548 |
Protein GI | 148658343 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TGGCGATTGA CATACGTGAT GTGCGCGCGC ACTATGGCAA AGGGCAACGG CGCGTCGAGG CGCTGAAGGG CGTTTCTCTG GACGTGCAGC GCGGCGACAT CTTTGGTCTG CTCGGACCCA ATGGCGCAGG CAAGACGACG CTGCTCTCGT GCATCGAGGG CTTGCATCGC CCGGATACCG GCGCCATCGT CGTCGCTGGC ATCGATGTGC TGCGCGATCC GCAACGCGCC CGGCGCAAAC TGGGCATTCA ACTCCAGAGC ACTGCGCTGA TCGACGGATT GACTGCGACC GAACTCATCG AAGTCTACGC TGCGCTCTAC GAAGTCTACC CATCGCGCAG CAGGATACTG GAACTGCTGG AACAGTTCGC CCTTGTTGAT CAGGCGCACC GGCGGGCGAA ACAGATGTCG GGCGGGCAGC AGCAGCGTCT GGCGCTGGCA ATCGCACTGT CCACCAACCC GGAAATTGTG TTGCTCGACG AACCGACTGG ATCGCTCGAT CCGGCTGCGC GCCGCGAAGT CTGGCGCATG ATCCGCACAC TGAAGGATCA GGGGCGCACG ATTGTGATCA CAACGCACAG TATGGACGAA GCGGAGTCGC TGTGCGGGCG CGTAGCGATC TTAGATGAGG GGCGCATCGT GGCGTGCGAC TCGCCGCACC GCTTGATCGC CGCAGCCGAC GTGCGACCGG TGCTGAAAGC AACGGTTGAT CTGCCGCTGG ACGCCCTTCC GCCATTGACT GGCGCACTGG AGATGCGCTA CGTCGGCGAA CGACTCGAAA TCGAGACGGC AAATCCTGAA GCCACGCTGC AGGCGCTCTA CATGGCGGCG CAACAGTACG GACGGTTGGT GCGCGATATT ACTGTGCGCC AGCCTAACCT GGAAGATGTG TACCTCAAAT TGACAGGAAG GAGCCTGAGC CAGCTATGA
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Protein sequence | MSELAIDIRD VRAHYGKGQR RVEALKGVSL DVQRGDIFGL LGPNGAGKTT LLSCIEGLHR PDTGAIVVAG IDVLRDPQRA RRKLGIQLQS TALIDGLTAT ELIEVYAALY EVYPSRSRIL ELLEQFALVD QAHRRAKQMS GGQQQRLALA IALSTNPEIV LLDEPTGSLD PAARREVWRM IRTLKDQGRT IVITTHSMDE AESLCGRVAI LDEGRIVACD SPHRLIAAAD VRPVLKATVD LPLDALPPLT GALEMRYVGE RLEIETANPE ATLQALYMAA QQYGRLVRDI TVRQPNLEDV YLKLTGRSLS QL
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