Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4247 |
Symbol | |
ID | 5211232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5329937 |
End bp | 5331163 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597836 |
Product | ROK family protein |
Protein accession | YP_001278540 |
Protein GI | 148658335 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.120914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.401593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGTC TGCTGGCAAA AGCCACGCGG CAACACACGA GAAACCACAA CAGTCGGCTG GTGCTGCGTG TCATTTATGA AGACGAAGCG ATCAGTCGCG CGGATATTGC GCGGAAGACC GGGTTGACCC GCACAACCGT CTCGGCAGTC GTGAACGAAC TGATCGAACA GGGGTTGATT GAGGAGACCG GCGCCGGTCA ATCGTCGGGA GGGCGACTGC CCATTCTGCT GCGCGTGGTA CACGAGTCGC ACTGTGTGGC GGCGTTGAGT TTCGAGGATA CGCAGATCGT CGGGGCGCTC GTTGATATGC GCGGCGGTAT TCAGCGACGG GTCAGCGTCC CGTTGCAGGG GTATCGTCCT GAAGATCTGC CTGGCTATCT GACGCAGTTG CTCGACGATC TGACGGCAGA CCCGGCGCCG CACATCCTGG GGATCGGTTT GAGCATGCCG GGGATTGTGG ACCCCGTGCG CGGCATGGTG CGGCGCGCGG TCAATTTTGG TCTCGTCGAT ACCCCTTTGC GGCAGTTGCT TCAGGATCAG TACCGTTTGC CGGTGTATCT CGACAATGCT GCGCGTCTGA CGGCGCTGGC TGAGTACATG TTCGGCGATG GCGCCGCCAG CGGTAACCTG GTGGTGATCA GTATCGGGGT TGGCGTGGGG GCTGGCATTG TACTCAACGG CGCCCTGTTT TCAGGTGACG GGTTTGGCGC TGGCGAAATC GGTCACGTCG TCGTTGCTGA CAATGGCATC CGCTGCAACT GCGGCAATGT CGGCTGTCTG GAAACGGTTG CCAGCGTTAC GGCAATCGTT CGCGCTGCGC GCAGGCTTGC CACCGATCCG TCGTCACGTC TGCGCTCACT GGCGTCGGCA GCTGCGGCGA TCGACTTCAA TACCTTTTGC CGGGCGCTCG AAGAGGGTGA TGATGGTGTT GCCGGGATCG TCACAGAGGT CGGGCGCTAC CTCGGAATCG CAGTGGCGCA TATCGTCGGA TTGCTCAATG TCGAGCGCAT CGTGCTGACC GGCGCGATTG CCGCGCTTGG TCCACCACTG CTGGAAGCGG TCAAAACCTC GCTTGCACGT CACGCGCTCG CTCCGCTGGC AGCGATGACG AGGGTCGATC TGGTTCCCGA ACGACATGAC GCGGTGCTGC TGGGTATCGC CGCAATGGTG CTCGATCATG AGTTTGGGTT GCTGCGCTTG GATAGTCAGG CGCACATGCA GCACTGA
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Protein sequence | MRSLLAKATR QHTRNHNSRL VLRVIYEDEA ISRADIARKT GLTRTTVSAV VNELIEQGLI EETGAGQSSG GRLPILLRVV HESHCVAALS FEDTQIVGAL VDMRGGIQRR VSVPLQGYRP EDLPGYLTQL LDDLTADPAP HILGIGLSMP GIVDPVRGMV RRAVNFGLVD TPLRQLLQDQ YRLPVYLDNA ARLTALAEYM FGDGAASGNL VVISIGVGVG AGIVLNGALF SGDGFGAGEI GHVVVADNGI RCNCGNVGCL ETVASVTAIV RAARRLATDP SSRLRSLASA AAAIDFNTFC RALEEGDDGV AGIVTEVGRY LGIAVAHIVG LLNVERIVLT GAIAALGPPL LEAVKTSLAR HALAPLAAMT RVDLVPERHD AVLLGIAAMV LDHEFGLLRL DSQAHMQH
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