Gene RoseRS_4247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4247 
Symbol 
ID5211232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5329937 
End bp5331163 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content61% 
IMG OID640597836 
ProductROK family protein 
Protein accessionYP_001278540 
Protein GI148658335 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.401593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGTC TGCTGGCAAA AGCCACGCGG CAACACACGA GAAACCACAA CAGTCGGCTG 
GTGCTGCGTG TCATTTATGA AGACGAAGCG ATCAGTCGCG CGGATATTGC GCGGAAGACC
GGGTTGACCC GCACAACCGT CTCGGCAGTC GTGAACGAAC TGATCGAACA GGGGTTGATT
GAGGAGACCG GCGCCGGTCA ATCGTCGGGA GGGCGACTGC CCATTCTGCT GCGCGTGGTA
CACGAGTCGC ACTGTGTGGC GGCGTTGAGT TTCGAGGATA CGCAGATCGT CGGGGCGCTC
GTTGATATGC GCGGCGGTAT TCAGCGACGG GTCAGCGTCC CGTTGCAGGG GTATCGTCCT
GAAGATCTGC CTGGCTATCT GACGCAGTTG CTCGACGATC TGACGGCAGA CCCGGCGCCG
CACATCCTGG GGATCGGTTT GAGCATGCCG GGGATTGTGG ACCCCGTGCG CGGCATGGTG
CGGCGCGCGG TCAATTTTGG TCTCGTCGAT ACCCCTTTGC GGCAGTTGCT TCAGGATCAG
TACCGTTTGC CGGTGTATCT CGACAATGCT GCGCGTCTGA CGGCGCTGGC TGAGTACATG
TTCGGCGATG GCGCCGCCAG CGGTAACCTG GTGGTGATCA GTATCGGGGT TGGCGTGGGG
GCTGGCATTG TACTCAACGG CGCCCTGTTT TCAGGTGACG GGTTTGGCGC TGGCGAAATC
GGTCACGTCG TCGTTGCTGA CAATGGCATC CGCTGCAACT GCGGCAATGT CGGCTGTCTG
GAAACGGTTG CCAGCGTTAC GGCAATCGTT CGCGCTGCGC GCAGGCTTGC CACCGATCCG
TCGTCACGTC TGCGCTCACT GGCGTCGGCA GCTGCGGCGA TCGACTTCAA TACCTTTTGC
CGGGCGCTCG AAGAGGGTGA TGATGGTGTT GCCGGGATCG TCACAGAGGT CGGGCGCTAC
CTCGGAATCG CAGTGGCGCA TATCGTCGGA TTGCTCAATG TCGAGCGCAT CGTGCTGACC
GGCGCGATTG CCGCGCTTGG TCCACCACTG CTGGAAGCGG TCAAAACCTC GCTTGCACGT
CACGCGCTCG CTCCGCTGGC AGCGATGACG AGGGTCGATC TGGTTCCCGA ACGACATGAC
GCGGTGCTGC TGGGTATCGC CGCAATGGTG CTCGATCATG AGTTTGGGTT GCTGCGCTTG
GATAGTCAGG CGCACATGCA GCACTGA
 
Protein sequence
MRSLLAKATR QHTRNHNSRL VLRVIYEDEA ISRADIARKT GLTRTTVSAV VNELIEQGLI 
EETGAGQSSG GRLPILLRVV HESHCVAALS FEDTQIVGAL VDMRGGIQRR VSVPLQGYRP
EDLPGYLTQL LDDLTADPAP HILGIGLSMP GIVDPVRGMV RRAVNFGLVD TPLRQLLQDQ
YRLPVYLDNA ARLTALAEYM FGDGAASGNL VVISIGVGVG AGIVLNGALF SGDGFGAGEI
GHVVVADNGI RCNCGNVGCL ETVASVTAIV RAARRLATDP SSRLRSLASA AAAIDFNTFC
RALEEGDDGV AGIVTEVGRY LGIAVAHIVG LLNVERIVLT GAIAALGPPL LEAVKTSLAR
HALAPLAAMT RVDLVPERHD AVLLGIAAMV LDHEFGLLRL DSQAHMQH