Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4242 |
Symbol | |
ID | 5211227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5317892 |
End bp | 5318812 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597831 |
Product | hypothetical protein |
Protein accession | YP_001278535 |
Protein GI | 148658330 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00328451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGAACC GTCGTATCCG TGTCGATCCG TGTTCTCTCT CGGTTCTCCG GCTCGCATCT GGATGGATGC TGCTGGTTCT GTTGCTGACC TCATGTGCGC CATCAGTCAC GGATCGCGCA GCCCAACCAA CGCCGCTCCT TACCGATGCG CTGCCGACGC CGCGATTGGA AGGCATCGCC GCCGAGCGGC GGGAGGTGCG CTTCGTCAGC GGCGACGTGG AACTGGCTGG CGAACTCGAT CTGCCGATGG GTTCCGGTCC GCACCCACTG GTGTTCATCA TTCACCACTC CGGTCCTGTT CCCCGCGACG CATACGGGTA TCTGGCAGAG ATTCTGCTGC GCGCTGGATA TGCCGTCTTC CGTTTCGACA AACGCGGCAC TGGCGCGAGC GGCGGGGTGT ACGGGTGTTG CGAGCGTGAC GATGCACTGG CCGCCTATCG CGCAGCCGTA GCGCAGGCCG GGATTGACCG CTGTCGCGTC TTCATTGTGG CGCAGAGCAT AGGGACGCAA CACCTTGCTG CGCAGTATCA GGCATACCTT CAGGTACAGC GTCCACGCGG CGTGGCGCTC CTCTCGAATC TGCTGCGTGC CGACGATATT GTGCGCATCG CGGCGCCGAT CATCATCATT GTGGCTGATA GCGAACCAGA TCTGAACGCC ATCGGTCCGG AAGCGGCAGC AGCGCACAAT GCGCGCTACG CAGCGGGTTC GACATTGTAC ATCGCCGACG GCGCTGAACA TACCCTCTTC GACATCCGTG ATGGTCCGAT TGATTGGACT GATCCTGCAT GGGTCGACCG CTATCACCGT GGAGCAATGC AAGCGCTTGT GCAGCAACTC GATGCGTGGA GCGCTGTGCA CGTGTCGGGA TCATGCTCAT CCCTGCGATC AAGGAATGTG ATAGCGAACC CCAACCGATA G
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Protein sequence | MLNRRIRVDP CSLSVLRLAS GWMLLVLLLT SCAPSVTDRA AQPTPLLTDA LPTPRLEGIA AERREVRFVS GDVELAGELD LPMGSGPHPL VFIIHHSGPV PRDAYGYLAE ILLRAGYAVF RFDKRGTGAS GGVYGCCERD DALAAYRAAV AQAGIDRCRV FIVAQSIGTQ HLAAQYQAYL QVQRPRGVAL LSNLLRADDI VRIAAPIIII VADSEPDLNA IGPEAAAAHN ARYAAGSTLY IADGAEHTLF DIRDGPIDWT DPAWVDRYHR GAMQALVQQL DAWSAVHVSG SCSSLRSRNV IANPNR
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