Gene RoseRS_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4242 
Symbol 
ID5211227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5317892 
End bp5318812 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content61% 
IMG OID640597831 
Producthypothetical protein 
Protein accessionYP_001278535 
Protein GI148658330 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00328451 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGAACC GTCGTATCCG TGTCGATCCG TGTTCTCTCT CGGTTCTCCG GCTCGCATCT 
GGATGGATGC TGCTGGTTCT GTTGCTGACC TCATGTGCGC CATCAGTCAC GGATCGCGCA
GCCCAACCAA CGCCGCTCCT TACCGATGCG CTGCCGACGC CGCGATTGGA AGGCATCGCC
GCCGAGCGGC GGGAGGTGCG CTTCGTCAGC GGCGACGTGG AACTGGCTGG CGAACTCGAT
CTGCCGATGG GTTCCGGTCC GCACCCACTG GTGTTCATCA TTCACCACTC CGGTCCTGTT
CCCCGCGACG CATACGGGTA TCTGGCAGAG ATTCTGCTGC GCGCTGGATA TGCCGTCTTC
CGTTTCGACA AACGCGGCAC TGGCGCGAGC GGCGGGGTGT ACGGGTGTTG CGAGCGTGAC
GATGCACTGG CCGCCTATCG CGCAGCCGTA GCGCAGGCCG GGATTGACCG CTGTCGCGTC
TTCATTGTGG CGCAGAGCAT AGGGACGCAA CACCTTGCTG CGCAGTATCA GGCATACCTT
CAGGTACAGC GTCCACGCGG CGTGGCGCTC CTCTCGAATC TGCTGCGTGC CGACGATATT
GTGCGCATCG CGGCGCCGAT CATCATCATT GTGGCTGATA GCGAACCAGA TCTGAACGCC
ATCGGTCCGG AAGCGGCAGC AGCGCACAAT GCGCGCTACG CAGCGGGTTC GACATTGTAC
ATCGCCGACG GCGCTGAACA TACCCTCTTC GACATCCGTG ATGGTCCGAT TGATTGGACT
GATCCTGCAT GGGTCGACCG CTATCACCGT GGAGCAATGC AAGCGCTTGT GCAGCAACTC
GATGCGTGGA GCGCTGTGCA CGTGTCGGGA TCATGCTCAT CCCTGCGATC AAGGAATGTG
ATAGCGAACC CCAACCGATA G
 
Protein sequence
MLNRRIRVDP CSLSVLRLAS GWMLLVLLLT SCAPSVTDRA AQPTPLLTDA LPTPRLEGIA 
AERREVRFVS GDVELAGELD LPMGSGPHPL VFIIHHSGPV PRDAYGYLAE ILLRAGYAVF
RFDKRGTGAS GGVYGCCERD DALAAYRAAV AQAGIDRCRV FIVAQSIGTQ HLAAQYQAYL
QVQRPRGVAL LSNLLRADDI VRIAAPIIII VADSEPDLNA IGPEAAAAHN ARYAAGSTLY
IADGAEHTLF DIRDGPIDWT DPAWVDRYHR GAMQALVQQL DAWSAVHVSG SCSSLRSRNV
IANPNR