Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4231 |
Symbol | |
ID | 5211216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5300966 |
End bp | 5302510 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640597820 |
Product | hypothetical protein |
Protein accession | YP_001278524 |
Protein GI | 148658319 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00442876 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGAAGA TTATTGTTGG CTTAGCACTG ATTGGGAGCA TTGTCCTGGC TGCATGCGGC CCGCTGGCAT CGGCGCCGGC AACCCCCGAG ACCTGGACGC CTCCGGCGAC GGCGACCCCT GTCCCCACTG CAATCCCGAC GCCAACGCGC CCGGCGTTGA CGACGTATAC CGTTCAGCGC GGGACCATCG AGCGAAGCGT AGAGTTGCAG GGACGAGTTG CAGCCGTTGG TGAGCGTGAA CTCTTCTTCG CCGTCGATGG CGTGGTCAAA GCGGTCTATG TGACGCCCGA TACCGAAATC ACCAGAGGTC AGGTGCTGGC GGAACTGGAG GCGGGTGAAC TGGAGGATCG CCTGGCGCAG GCGAAGCAGC AATACACACT GGCGCAACAG CAACTCGACC GCGCGCTCGG TGAGATGCGC TTTCCGCTGC GACGCGCTGA GATCGACCTG GAAGTGGCGC GCACGGCGCT GGCGCAACTG CTCGCCCCGC CCGACGCCAC CAAAATTGCC GCAGCCCGCG CCGCGCTTCA GCAGGCTGAG GCAGCGCGCG ACCGTGCGCG CAACGATGCA TCGGCAGTCA AAACGCGCGC CGAACTTGCT CTCCAGCAGG CGCAGAAACG CCTGATCGCC GCCCAGGCGG AGTTTAGCGC CGCTTCATAC GCCGCAGAGC AGGACAAAAC CGACAACAGG GCGCAGGAAC GTCTCGCCAG AGCGGGTGAT GCGCTGCGCG CGGCGGAAGA AGAAGTCGCG CGGCTCCAGA TCGAGTACGA TACTGCGCGC AACAACGAAA TCGCTGCGGT GCAGGCAGCC GAAGCGCAGG TGATGCTGGC GCAAACCACG CTCGATGAGT TGCTCAAAGG TCCTGACCCG CTCAAAGTCG CCGAAGCGCG GCGCGCCGTC GCCGTGGCGG AACTGGCGGT CGAGCAGGCA CGCAGCAATA TTCGTGTCGA TCCCCAACTT GAGCGCGCAG TCGAAGAAGC GAAACAGGGG GTTGATGATA TTCGGCGCCA GATCGAGGCG CTCAAACTGG TCGCCGGTTT CAATGGGCGC ATTCTGGCAG TGAATGTTGC GCCCGGATCG GTCATTCGCG CCGGAGAACC GGCCTTCATC GCGCTGGATC CGTCGGTCGC ATCCGATGCA CTGGAAGTGC TGGTCACGAG CAGTTCGGCG CCGCTGGTTG CCGGGCAACC GGTGTCGATC TCCTTCGCCC GCTATCCGGG TGTGACATAC CAGGGTACGG TCACCAGCAT TCCCGGCGGC AGCTCGAACA GCGCTGCGGC CCTGAGCGGC TACCACATCG CCTATGAGCC AGCCGACCTG CAACTCGAGA CGGGAGACGC AGCAACGGTG ACGGTCGTTC TGGCGCGGCG CGAAGGCGTG CTCTGGTTGC CGCCAAAAGC CATTCGCGCC GACTCGCGCA GTTACGTGCT GGTGCAGCGC GGGGATCGCC CGGAGCGGGT CGATATTCAA ACAGGATTGA CAACGGCGGA TCAGGTGGAA ATCCTCAGCG GTCTGAACGA AGGCGACGTT GTCATCGGGC AGTAG
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Protein sequence | MRKIIVGLAL IGSIVLAACG PLASAPATPE TWTPPATATP VPTAIPTPTR PALTTYTVQR GTIERSVELQ GRVAAVGERE LFFAVDGVVK AVYVTPDTEI TRGQVLAELE AGELEDRLAQ AKQQYTLAQQ QLDRALGEMR FPLRRAEIDL EVARTALAQL LAPPDATKIA AARAALQQAE AARDRARNDA SAVKTRAELA LQQAQKRLIA AQAEFSAASY AAEQDKTDNR AQERLARAGD ALRAAEEEVA RLQIEYDTAR NNEIAAVQAA EAQVMLAQTT LDELLKGPDP LKVAEARRAV AVAELAVEQA RSNIRVDPQL ERAVEEAKQG VDDIRRQIEA LKLVAGFNGR ILAVNVAPGS VIRAGEPAFI ALDPSVASDA LEVLVTSSSA PLVAGQPVSI SFARYPGVTY QGTVTSIPGG SSNSAAALSG YHIAYEPADL QLETGDAATV TVVLARREGV LWLPPKAIRA DSRSYVLVQR GDRPERVDIQ TGLTTADQVE ILSGLNEGDV VIGQ
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