Gene RoseRS_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4220 
Symbol 
ID5211205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5283542 
End bp5284267 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content60% 
IMG OID640597809 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001278513 
Protein GI148658308 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC AGGTAAACCT CTATCTCTCG CGTCAGTCAT CGTCGATACG CCGATATGTA 
TGGGAGCAGG TTGTCCAGGC GGCGGTCGGA TGGATTCCGG GTATCGTCGG CATTGGCGTG
CGCGCGGTTG CGTATCGCGC GATCCTGCAC ATGGAGGGCG TGGCAGCGAT TGAGGACGGG
GTGCGCATTC GTTTTGCCGA TCATGTGCGT CTCGAACGGG GCGTGTACCT CGATCACGGC
GTCTACCTCC ATGCCTGTCC TGGCGGCATC TCCATCGGTC GCGAAAGTTA TGTGATGAAG
AACGCCATCC TGCACGTCTA CAATTTCCGC AATCTGCCGC ACGCTGGCAT TCATATCGGC
GCGCGGTCGC TGATCGGCGA AGCGTGTATT TTGCGGGGTC AGGGCGGCAT CAGGATAGGT
GATGACGTCT TTCTCGCGCC GATGGTGCAG ATGCTGGCGG TGAACCATAT CTATCACGAT
ACGACCAGAC CGATCAGTCT GCAGGGGATC ACCTGTCAGG GCATCATCGT CGAGGACGGC
GCATGGATTG GGGGCGGCGC GATTATCCTC GATGGAGTTC GCATCGGCAA AAATGCCGTC
GTTGGCGCTG GCGCCGTCGT CACCCGTGAT GTACCCGATT ATTGCGTCGC CGTCGGCAAC
CCGGCGCGCG TTGTGCGCAA TCTGCGTGAG CAACCGATGG CACCGGTGAA CCTGACCGTG
TATTGA
 
Protein sequence
MIDQVNLYLS RQSSSIRRYV WEQVVQAAVG WIPGIVGIGV RAVAYRAILH MEGVAAIEDG 
VRIRFADHVR LERGVYLDHG VYLHACPGGI SIGRESYVMK NAILHVYNFR NLPHAGIHIG
ARSLIGEACI LRGQGGIRIG DDVFLAPMVQ MLAVNHIYHD TTRPISLQGI TCQGIIVEDG
AWIGGGAIIL DGVRIGKNAV VGAGAVVTRD VPDYCVAVGN PARVVRNLRE QPMAPVNLTV
Y