| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4191 |
|---|
| Symbol | |
|---|
| ID | 5211175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5249088 |
|---|
| End bp | 5250734 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640597779 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278484 |
|---|
| Protein GI | 148658279 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00328451 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAC CTGACCTCAA CCCCGACAGC ATTGCCGATC TGGCAACCCG CCAGATCGTG
ATCCAGTTGC TGAACGTCAT CGAGACGCTG GCGGCTGAGA ACGCCGCCCT GCGGGTTGAA
AACCAGAATC TGCGGGATGA GGTGGCACGG CTGAAGGGAC GCTCGGGTAA GCCCGACATC
AAACCACCCA CGCCGCCGCC CAGCCCGCCG CCTGCGGATC ATTCCTCGGA GGCCGAGCGC
CGCACGCGCA CGCCACGGGG CAAGCCGAAA AAGAACGCGA CCCTGATTGT CACGCACGAG
GAGCGCTGCG GGGTGGATCC GGCGACCCTG CCCCCCGATG CGGTGCGCCA TGGGACAACC
GATTCCATCG TGCAGCGCCT GCGCATCGAC GTGGAGGTGG TCCGCTTCGT GCGGGAGCGG
TGGTACGTCC CCAGCACCAA CACGCTCATC ACCGCACCGT TGCCGCCCGG CTACCGGGGT
GGGTTTTGCC CCACGACCCA TACCATCGTT CCCGCACTCG GTCACGGGGC AAACGTCAGT
CAGCCCGCGC TGCTGCGCTT TCTGCGGGAT GTCGGTCTGA AGATTGGCAC GGGCACGGTG
GCGCGCATGC TGCTGGATCC GAAGGGACGC TGGGCGGACG AAGCCGCCGC GATTCATCAA
ACCGGCCTCG CCACCGGGTC GTGGGTCGCC ACCGACCAGA CCAGTACCCG CGTGGATGGG
CAGAACGAGG TCTGCCACGT TGTGGGCAAT GCCTGGTTCA CGAGCTATCA TACCCGTCCC
GGCGGCACGC GCCAGGATGT CCTGGCGGTC ATCTGGGGCC AGGAACTCCG CTATCGCCTC
AATGACGAGT CGCTGGCGTG GCTGCAGGCT CGCAGCCTGC CGCACACCCT GCTCCGCCGG
CTGCGGGAGG CCCTGCCCCG CGGCACGGAC ATGACGGCGG CGGAACTCCA GCAGCACCTG
ACCAACGCCG GGATCACGCT CACCCCGCAG CAGGTACAGC CGGTCGGCGA TGCGCTGGCG
CTTGCCGCCT ATCACGCCCA AACCCAGGCG CCCGTCCTGC GCTGGTTGCT GAGCGATGAT
GCCCCCGTGT ATGACCACCT CACGACCACC CACGCCCTGT GTTGGGTGCA TGATTGGCGG
CATTACGCCA AGCTTGCCCC ACGGGCGCCC CATCATCAGG CCGAACTCGC CGCGTTTGGG
GAACGCTATT GGACGTTCTA TCGCGACCTG CTGGCCTATC AACAGGCGCC CACTGCGGCG
GAACGCGCAC GGTTGGCGGA TGCGTTTGAC GCCTTGGTGG AAAAAGAGAC CGGCTATGCG
GCGTTGGATG ACCGGATCAG CAAAACCGCC GACAAACGGA CCCAGTTGTT GGCGGTGCTG
AAACATCCCG ACATTCCCCT GCACAATAAT GATATGGAAC TGGCGGCGCG ACGCCGCGTG
CGCAAACGCG ATATCAGTTT CGGCCCTCAA TCCCGAGACG GGGCACGGGC GTGGGATACC
TTCCAAACCC TGGCCGCCAC CGCCGCCAAA CTCGGCGTGG GGTTCTTTCA CTATCTCCGC
GACCGCATCG TCACGCCGGA GACCACCCTC ACCTTAGCCG AACGGGTAGC GCAACGGGCG
GGTATCGCTG TGCCTTCATC GGCCTGA
|
|---|
| Protein sequence | MQIPDLNPDS IADLATRQIV IQLLNVIETL AAENAALRVE NQNLRDEVAR LKGRSGKPDI
KPPTPPPSPP PADHSSEAER RTRTPRGKPK KNATLIVTHE ERCGVDPATL PPDAVRHGTT
DSIVQRLRID VEVVRFVRER WYVPSTNTLI TAPLPPGYRG GFCPTTHTIV PALGHGANVS
QPALLRFLRD VGLKIGTGTV ARMLLDPKGR WADEAAAIHQ TGLATGSWVA TDQTSTRVDG
QNEVCHVVGN AWFTSYHTRP GGTRQDVLAV IWGQELRYRL NDESLAWLQA RSLPHTLLRR
LREALPRGTD MTAAELQQHL TNAGITLTPQ QVQPVGDALA LAAYHAQTQA PVLRWLLSDD
APVYDHLTTT HALCWVHDWR HYAKLAPRAP HHQAELAAFG ERYWTFYRDL LAYQQAPTAA
ERARLADAFD ALVEKETGYA ALDDRISKTA DKRTQLLAVL KHPDIPLHNN DMELAARRRV
RKRDISFGPQ SRDGARAWDT FQTLAATAAK LGVGFFHYLR DRIVTPETTL TLAERVAQRA
GIAVPSSA
|
|---|
| |