| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4189 |
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| Symbol | |
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| ID | 5211173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5247270 |
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| End bp | 5248556 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597778 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001278483 |
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| Protein GI | 148658278 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000679447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATGA CAAACGGGAA AATCGCCGCG ATTGAAGCCG AAAACGCCAT GCTGCGTCAG
CGCATCAGCG AGTTGGAAGC CCAACTGACC TCCCGCAACG ACCATATCGC CCCGTCCAAC
CATCAAGAGA TCGAGGAATT TCGCGGTTTT CGCACGCTCA TCGAAACGGC GCCGCAAGCC
ATCGGCATCA TCACCCTCGA TGGCGTCATC ACCTATGCGA ATGCTGCATT CTGCTCACTG
ATCGGCTACG ACACGCTGAT TGGCGCACAT ATGACGATGT TGCACTTCGA GGAAGATCTG
CCAGTATTGC AGGCAAGTCT GCAGGACGTG ATGCACCACG GCGTCTGGCG CGGCGTCGCG
CGCCTGCGCC GACGCGACGG CAGCGCCATT CCGGTGCGGA TCAACGCCTT CGTCATCCGC
GACGACGATG GGCAGCCAAT GGCAATGACC GGCATGTTCG AAGACCTCAC CGAAGAACTC
CGGCGCGAGG AGCGGCTCCG CCTGTTCGAG GCGCTGGTCG AAAACGCCCC CGATGCCATC
GGTGTCGCCG ATTTCAAGGG CAACATCATC TACGCCAACG CTGCGTATCA GGCGTTGACC
GGCTACGGCG AGCAACTGAT CGGAATGAAT GGCTTCGACT ATATTGTTGA AGAGGATCAT
CGTTCAGCGC AGATCGCACT GGCACGCCTC GCCGAGGGGA AAGCAGCGTT TCTCGAGACG
CACATCCGGC GCAAAGATGG CAGCATTGTG CCGGTGGCAT CGACGATGTA TGCGCAACCC
GCGCCGGGCG GCGAGCTGCG GATCATTGGC TTCCTGCGCG ACATCAGTGA CCAGAAGCGC
GCCGAGGCGG AACGCTTCGC GCTCCAGCAG CAGGTAATCG AGGCGCAGCG CGCCGCCATC
CGCGAACTCT CCACCCCGCT CATTCCGATC AGCGAGACGG CGGTGATTAT GCCGCTGGTC
GGCGCCATCG ACAGCGCGCG GGCGCAGCAG ATCATCGACA CCCTGCTCGA AGGGGTCGCC
GCTCATCGCG CGGAGATGGC GATTGTTGAC ATCACCGGGG TGCAGGTGGT CGATACGCAG
GTCGCCAATG CGCTGGTGCG CGCCGCGCAG GCGGTGCGGC TGCTGGGGGC GCAGGTGATC
CTGACCGGCA TCAAGCCGCA GGTGGCGCAG ACGCTGGTGC AGCTGGGGGT CAGCCTGGAA
GGCATCCGCA CCACCGGGTC ACTCCAGACC GGCGTGCGCC TGGCGTTGAC CGGGGATGCG
ACGAAACACC GGAATGGCAA ACCATAG
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| Protein sequence | MTMTNGKIAA IEAENAMLRQ RISELEAQLT SRNDHIAPSN HQEIEEFRGF RTLIETAPQA
IGIITLDGVI TYANAAFCSL IGYDTLIGAH MTMLHFEEDL PVLQASLQDV MHHGVWRGVA
RLRRRDGSAI PVRINAFVIR DDDGQPMAMT GMFEDLTEEL RREERLRLFE ALVENAPDAI
GVADFKGNII YANAAYQALT GYGEQLIGMN GFDYIVEEDH RSAQIALARL AEGKAAFLET
HIRRKDGSIV PVASTMYAQP APGGELRIIG FLRDISDQKR AEAERFALQQ QVIEAQRAAI
RELSTPLIPI SETAVIMPLV GAIDSARAQQ IIDTLLEGVA AHRAEMAIVD ITGVQVVDTQ
VANALVRAAQ AVRLLGAQVI LTGIKPQVAQ TLVQLGVSLE GIRTTGSLQT GVRLALTGDA
TKHRNGKP
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