| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4182 |
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| Symbol | |
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| ID | 5211166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5238334 |
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| End bp | 5238996 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597771 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001278476 |
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| Protein GI | 148658271 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.179284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000596951 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGATCT TCGTTCGCAT CCGAGACATT CTGAGCGCCA ACATCAACGC CCTGCTCGAC
AATGCGGAGG ACCCGGAGAA AATGGCGAAT GAGTATCTGC GCCAGCTGGC CAACCAGGAA
TATGAGGTGA AAACCAGCGT TGCGGCGGCA ATGGCGGACC TGGCGCGGCT GAACCGTATG
GAGGCGCAAT ATCTGGCAGA GACGGAAAGT TGGGACCGCA AAGCAGAGGC AGCGCTGCGC
GCCGGTGATG AAGCGCTGGC AAAAGCCGCT TTGGCGCGCA AAGTGCAGGC CAGCAAACTC
TACGAGCAGT ACCGCGATCA GTCGGATGCG CAGGAAAAGC AGGTCGAACA ACTGGAGCAG
GCGCTGGTGC AGTTGCAGAC ACGCATCGCC GAAGTGCAGG CCAAGCGCGA TATGATCATT
GCGAAGAAGA ACCGTGCGCA GACCCACGAA GCCATTCAGC GCACCGTGCG TCAGGCGACG
CGTATCTCGG CGATGGATAA ACTGGATCAA CTGGAGAGCC GCGTCGATGA GCGCCTCGAT
CGGGCTGAGG CGATGACGAA ACTCGAAGGG GATACGCTGG AGAACAAGTT CCGCAATCTG
GAGCGCGACA CTGCTGTGGA CGCGGAATTT GAGGAGTTGA AGCGACGGTT GGGTCAGGGT
TGA
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| Protein sequence | MSIFVRIRDI LSANINALLD NAEDPEKMAN EYLRQLANQE YEVKTSVAAA MADLARLNRM
EAQYLAETES WDRKAEAALR AGDEALAKAA LARKVQASKL YEQYRDQSDA QEKQVEQLEQ
ALVQLQTRIA EVQAKRDMII AKKNRAQTHE AIQRTVRQAT RISAMDKLDQ LESRVDERLD
RAEAMTKLEG DTLENKFRNL ERDTAVDAEF EELKRRLGQG
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