| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4181 |
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| Symbol | |
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| ID | 5211165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5236065 |
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| End bp | 5238224 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597770 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_001278475 |
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| Protein GI | 148658270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.239535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000931508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAG CAGAGGAGGC GTCCTTGAAC ATCAGAAGCG CCGATTTACT CTTTACACCG
ATTCCTGAGC GGATCGCCCG TCTCCGCGAT CTGGCGTACA ACCTGTGGTG GACCTGGCAT
CCAGAAGCCC AGGATCTCTA CCGTCATATC GACGCTGATC TGTGGGAAGA GGACTACCAC
AATCCGGTCG ACTTTTTGCG CGACGTGCGG CAGCGCAAAC TGGAGGAAGC GGCAGCCAAC
CCGGAATATC TGGCTGAATA CGACCGGGTC ATGGCCGCGT TCGACCGGTA CATGGCTGCT
GAAGACACCT GGTATCGGCG CACGTTTGGC AACGCCAACG ACGTGACGAT TGCCTACTTC
TCGGCAGAAT TCGGTCTGCA CGAGTCGCTG CCGATCTATT CGGGCGGTCT TGGCGTGCTG
GCGGGTGACC ACGTGAAAGA GGCGAGCGAT CTGGGCTTGC CGTTTGTTGC GGTCGGCTTC
ATCTACCCGC AGGGGTATTT CCGGCAGCGT CTGGACCAGA GCGGCTGGCA GGAGGCGATC
TATTCCAAGT TGAACTTCGC CGACATCGCA GCCACGCAGG CGTTGACTGC CGACGGGCGT
GAGGTGGTCG TCGAGGTCGA TCTGCCGGGT CGCACCATCT ACGCCAAGGT CTACCGCATT
CAGGTGGGCC GGGTATCGCT GTTCCTGATG GATACGGACA TTCATCCAAA CAGTCCGCAG
GATCGCGAGT TATCGGCGCG GTTGTACGGC GGCGACCAGG AGATGCGGAT TGCGCAGGAG
ATCGTGCTGG GCATCGGCGG TGTGCGGGCG CTGCGTCAAC TCGGCATTCA CCCGACGGTC
TGGCATATGA ACGAGGGGCA TTCTGCGTTC CTGGTGCTCG AACTGGTGCG TGAGAAGGTT
GCTCAGGGCA TGCCGTTCGA TGAAGCATGG CGCGAGGTGC GCGCGCAATC GGTCTTTACC
ACGCACACGC CGGTTCCCGC CGGCAACGAC GCTTTCCCGC TCCACCTGAT GGAGAAGTAT
TTCAACCATT TCTGGCCCCA TCTCGGATTG ACCCGCGAAC AATTCTTCGA CCTGGCGCTG
CAACAGCAGA GTTGGGGACC GACCTTCGCC ATGACGGTGC TGGCGCTGAA GGGGTCGCAC
GCGCACAATG GTGTCAGCAA ACTGCACGGT CACGTGGCGC GTGGCATGTG GCACTGGCTC
TACCCGAACG TGCCGCAGGA CGAAGTGCCG ATCACGTCGG TGACGAACGG TATTCACAGC
AGCACATGGC TGGCGCCGGC CATGCGTCGC CTGTATGATG AAGTGCTTGG TCCTGATTGG
GAAGAGGACC TTGACAATGT TGCGCTCTGG GCGAAGGTGC GAGACATTCC CGACGAGCGG
TTGTGGGAAG TGCGTCAGGC GCTCAAAGGT GATCTCGTGG CAATTGCGCG CGAGCGCGTT
CGTCAGCGTC ATTTGCGCCT GGGATCGCCA CCGCAGGTCT GGCCCGTGCT TGAACCGGAG
ATTTTCACAA TCGGCTTTGC ACGCCGGTTC GCCACGTACA AGCGCGCAAC GCTGCTGTTC
CGCGAACCCG AACGGCTCAA GGCGCTGCTC AACCGTCGTG ACCGTCCGGT GCAGATCATT
TTTGCCGGTA AAGCCCATCC GGCTGACGAT CCGGGAAAAT TGTTCATCCA GCAGGTTTAC
CAGATGTCGC AGCAACCGGG GTTCCTTGGG CGCATCCTGT TCCTCGAAGA GTACGACATG
GCGCTGGCGC GCGCACTGGT GCAGGGGGTT GATGTCTGGC TCAATACGCC GCGTCGTCCC
TACGAAGCAA GCGGCACCAG CGGTCAGAAA GCGGCGCTGA ACGGCGTTGT CAATGTCAGC
GTCCTCGATG GCTGGTGGCC CGAAGCGTAT AACGGCGCTA ACGGCTGGGC TGTCGGCGAA
GCGCGCGAGT ACAGCAGTCA AGACGAGCAG GACTGGAACG ACGCACAGCA TCTGTACCGC
ATCCTGGAGC AGGAAGTGAT CCCAACCTAC TACGACCGCG GTTCCGACGG GATTCCACAC
CGCTGGCTGG CGATCAGCAA AGAGTCCATC GCCACCATCG CACCGGTGTT CAGCACCCGC
CGTATGGTCA AGGAGTATGT GACCCGGTTG TACCTGCCGG TGGCGGAAAT GCAGGCATAG
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| Protein sequence | MAEAEEASLN IRSADLLFTP IPERIARLRD LAYNLWWTWH PEAQDLYRHI DADLWEEDYH
NPVDFLRDVR QRKLEEAAAN PEYLAEYDRV MAAFDRYMAA EDTWYRRTFG NANDVTIAYF
SAEFGLHESL PIYSGGLGVL AGDHVKEASD LGLPFVAVGF IYPQGYFRQR LDQSGWQEAI
YSKLNFADIA ATQALTADGR EVVVEVDLPG RTIYAKVYRI QVGRVSLFLM DTDIHPNSPQ
DRELSARLYG GDQEMRIAQE IVLGIGGVRA LRQLGIHPTV WHMNEGHSAF LVLELVREKV
AQGMPFDEAW REVRAQSVFT THTPVPAGND AFPLHLMEKY FNHFWPHLGL TREQFFDLAL
QQQSWGPTFA MTVLALKGSH AHNGVSKLHG HVARGMWHWL YPNVPQDEVP ITSVTNGIHS
STWLAPAMRR LYDEVLGPDW EEDLDNVALW AKVRDIPDER LWEVRQALKG DLVAIARERV
RQRHLRLGSP PQVWPVLEPE IFTIGFARRF ATYKRATLLF REPERLKALL NRRDRPVQII
FAGKAHPADD PGKLFIQQVY QMSQQPGFLG RILFLEEYDM ALARALVQGV DVWLNTPRRP
YEASGTSGQK AALNGVVNVS VLDGWWPEAY NGANGWAVGE AREYSSQDEQ DWNDAQHLYR
ILEQEVIPTY YDRGSDGIPH RWLAISKESI ATIAPVFSTR RMVKEYVTRL YLPVAEMQA
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