| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4176 |
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| Symbol | |
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| ID | 5211160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5228836 |
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| End bp | 5230116 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597765 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001278470 |
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| Protein GI | 148658265 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.949796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAG AACAGTCCTC CCCCTTTCCG GCGGCGTCGT TTGCAGAAGC GCCATTCGCG
GAACGATCGT TGGAGAATCC TGATCGCATG CCGCTAAGCG GTATTCGGGT TATCGACGTG
GGCAACTTTC TTGCCGGTCC GTATGCAGCG TCGATCCTGG GGGAGTTCGG CGCGGAGGTG
CTCAAAGTCG AACACCCGAT TGGCGGCGAC CCGATGCGGC GTTTTGGCAC CCCCACCACA
CGTCACGACG CAACGCTTGC GTGGCTCAGC GAAGCACGGA ATCGCAAGTC AGTGACCATC
GATCTGCGTC AGCGGGAAGG GGTCGAACTG TTCCTCAAAC TGGTGGCGAA GTCGGACGTG
CTGATCGAAA ACTTTCGCCC CGGTACGATG GAGGAGTGGG GGCTGGGATG GGATGTGCTG
TGCAAAGCCA ATCCGGGTCT GGTGATGCTG CGTGTGTCGG GGTACGGGCA GACCGGTCCA
TACCGCCGTC GATCCGGTTT TGCGCATATC GCGCACGCAT TTGGCGGTTT GTCGTATCTG
GCCGGCTTCC CCGGCGAAAC GCCGGTGTTG CCCGGCACGG CGCCGCTTGG TGACTATATG
GCGAGTCTGT TCGGGGCGAT CGGCATTCTG CTGGCGTTGC GCCACAAAGA GAAAACCGGG
CGCGGTCAGG TGATCGATGT GGGGATTTAC GAGGCGGTGT TTCGTCTGCT CGACGAAATT
GCCCCCGCTT ACGGATTGTT CGGCAAGATT CGCGAACGTG AAGGCTCCGG GAGTTTTATC
GCCGTACCCC ACGGGCACTT CCGCACCAAA GACGACAAGT GGGTGGCGAT CGCCTGTACG
ACCGATAAGA TGTTCGAGCG TCTGGCGGAA GCGATGGAAC GTCCTGAACT CGCCTCTCCC
GAACTGTACG GCGATCAGCG TAAGCGTCTG GCAGCCCGCG ATACGGTCAA TCAGATCACG
ATCGAGTGGG TCGGCTCGTT GACGCGCGAG GAAGTCATGC GGCGCTGTCT CGAAAAGGAG
GTGCCCGTCG GTCCGCTGAA CAGCATCGCC GATATTTTTG AAGATGAGCA CTTTCGCGCC
CGTGGCAACC TTGCCTGCGT CGAGGCGGAA GGGGTCGGCG GGGTGGTGGT GCCCAATGTC
GTGCCCACCC TCTCTGAAAC GCCGGGACGT ATCACCAATC TGGGTCCGCC GCTCGGCAAT
GCCACGTATG AGGTCTTTCG CGAACTGTTG AACATTTCCG CCGACGAGAT CAAGCGCCTG
CGCAGTCGCA AGATTATCTG A
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| Protein sequence | MGQEQSSPFP AASFAEAPFA ERSLENPDRM PLSGIRVIDV GNFLAGPYAA SILGEFGAEV
LKVEHPIGGD PMRRFGTPTT RHDATLAWLS EARNRKSVTI DLRQREGVEL FLKLVAKSDV
LIENFRPGTM EEWGLGWDVL CKANPGLVML RVSGYGQTGP YRRRSGFAHI AHAFGGLSYL
AGFPGETPVL PGTAPLGDYM ASLFGAIGIL LALRHKEKTG RGQVIDVGIY EAVFRLLDEI
APAYGLFGKI REREGSGSFI AVPHGHFRTK DDKWVAIACT TDKMFERLAE AMERPELASP
ELYGDQRKRL AARDTVNQIT IEWVGSLTRE EVMRRCLEKE VPVGPLNSIA DIFEDEHFRA
RGNLACVEAE GVGGVVVPNV VPTLSETPGR ITNLGPPLGN ATYEVFRELL NISADEIKRL
RSRKII
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