| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4170 |
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| Symbol | |
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| ID | 5211154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5221896 |
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| End bp | 5222612 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597759 |
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| Product | sortase family protein |
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| Protein accession | YP_001278464 |
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| Protein GI | 148658259 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.578913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTG GGAAAATTTC GACATTGTGG CATCACCCGT TCGTTATGGT TGGACTTGCA
ATCGCGCTGA TTCTGCTTGG GATCGGTGCA GCGTACATGG TATGGTTGAA TATGCTGCGC
GATCAGGAAC GGCTCAACCC TTCCACCGAA CGCCTGCTGG AGGTCAGCGA CGGTCAACGC
ATTCCTCTGG CGCAACCAGA CCCCACGCCG GTTCCAACTG CACAAGCCAT TCCTGTTGCA
GCAACCAACC CGGAGAGTAC GCCAGCGCCA TCCGCCACGC CGGAAGTGTT GCCGCCAGAG
CGCCTGATCA TTCCGCGTAT TAATGTCGAC TGGCCCATCA CACCTGCGGA TGTTGATCAC
CTGCCGAAGT TCCGCGGCGT TGGATGGATA TTTGGCAGCG CTTTCCCCGG CATGCCCGGC
AATATGGTGC TGACCGGGCA TGCTGGCGGA CCATACGCGA CGCTGACGCG CCTCCACGAG
GTGCAACCGG GCGATGACAT TCTGGTGCAA ACAGAGACAG CCACGCATCG CTACCGCGTC
CAGACGATCT ACGAAACAAC CCCGGACGAC GTTCTGGCGA TGGCGCCCAG CGATAAGACG
ATTGCCACGC TCATCACCTG TAGCGGCGAC TGGATTCCAG AACGCCAGAC GAACGCGCGA
CGACTGATCG TTGTGGCGGC GTATGAGGGG ATGGCACGCG AAGGCGCTGG GGGCTGA
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| Protein sequence | MKSGKISTLW HHPFVMVGLA IALILLGIGA AYMVWLNMLR DQERLNPSTE RLLEVSDGQR
IPLAQPDPTP VPTAQAIPVA ATNPESTPAP SATPEVLPPE RLIIPRINVD WPITPADVDH
LPKFRGVGWI FGSAFPGMPG NMVLTGHAGG PYATLTRLHE VQPGDDILVQ TETATHRYRV
QTIYETTPDD VLAMAPSDKT IATLITCSGD WIPERQTNAR RLIVVAAYEG MAREGAGG
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